RNAseq TCGA analysis

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tymil...@gmail.com

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Mar 27, 2019, 10:45:39 PM3/27/19
to GlioVis - Data Visualization Tools for Brain Tumor Datasets
Hi Massimo,

Thanks again for putting GlioVis together! I'm interested in getting an expression matrix for the RNAseqV2 for GBM (174 samples). The TCGA GDC Data Portal now has FPKM that's mapped to Hg38. I'm wondering what the data for RNAseq for TCGA GBM in GlioVis represents? Is it RSEM or FPKM? Is it aligned to Hg38?

Thanks!
Ty

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