SubtypeMe for GBM cells

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roland....@gmail.com

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Dec 17, 2018, 12:52:52 PM12/17/18
to GlioVis - Data Visualization Tools for Brain Tumor Datasets
Hi,
I was looking for more information about the kind data input for SubtypeMe.

We are working with several so-called GBM stem cell lines, and the reviewers of our manuscripts often ask us to subtype those.

It would be great if we could use SubtypeMe to classify our cells.

We have micro-array and RNA-Seq data from the cells.

What are the expression values in the cells of the Expression data file?
How can those values be generated from RNA-Seq or micro-array data? (I'm not a bioinformatician :), but can get the necessary help if needed)

Thank you
Roland

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