about cistrome example

[shaoke lou]

Hello,

Thanks for your great work developing Giggle score!

Recently, we are using Giggle to do some analysis with Cistrome db.

I followed the examples from https://github.com/ryanlayer/giggle/blob/master/examples/cistrome/README.md.

Here are some issues:

1. what qc id be used once get the cistrome_id_qc.txt? Will this be used for peak file filtering? because no codes further use this file, I was wondering any suggestion to use this file?$GIGGLE_ROOT/examples/cistrome/get_qc.sh > cistrome_id_qc.txt

2. the following command doesn't work, get errors, and also what the format

of istrome_id_to_name_map.txt? I just cannot figure out which file to use here

$GIGGLE_ROOT/examples/cistrome/rename.py \ -m data/TF_human_data_information.txt \ -i data/TF_human \ -o data/named \ -n cistrome_id_to_name_map.txt

Thanks,

Shaoke