Error in geom_histogram
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Trevor L Davis
Jan 16, 2011, 9:24:12 PM1/16/11
to ggplot2
Today when making histograms in ggplot2 (using a freshly installed
version from CRAN) I got the following error: "position_stack requires
constant width". How do I fix the problem? Here is a reproducible
example (sorry for the big 1000 number data set, I'm doing charts
involving randomly generated numbers and ggplot2 only fails some of
the time so I just grabbed the numbers from the last time it failed).
Thanks!
Trevor Davis
Stanford (Dept of Economics)
# the plot command that fails below: qplot(data, geom = "histogram")
# where
data <- c(-3085343786.21786, -2573821227.61665, -3020053924.67167,
-2780832244.26526,
374092942.376734, -1503979297.33063, 1151317429.38695,
-2812670351.35645,
-111395725.437895, 1860448400.08500, -27044548.279974,
11234805264.8071,
2184374733.36106, 2597009850.83817, -2937243790.56636,
3950459474.09184,
6332683775.6722, 1266882290.47123, -2858090763.63565,
3083624729.87412,
-2054146868.81874, 23553452.7770443, -223586782.086373,
-3048660089.66220,
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-394828138.611244,
-3731596249.51178, -198951006.264874, -35556954.26968,
4011935846.83255,
-514826249.663561, -587330738.626301, -3438052333.463,
1621293868.80563,
2992047498.75096, 1982942498.91354, 2830588537.81410,
1016024131.11629,
3267850337.42599, -3196711079.315, -2938848965.35894,
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-2942956749.19911,
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1141798756.91945,
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1079507788.96153,
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)
qplot(data, geom = "histogram")
version from CRAN) I got the following error: "position_stack requires
constant width". How do I fix the problem? Here is a reproducible
example (sorry for the big 1000 number data set, I'm doing charts
involving randomly generated numbers and ggplot2 only fails some of
the time so I just grabbed the numbers from the last time it failed).
Thanks!
Trevor Davis
Stanford (Dept of Economics)
# the plot command that fails below: qplot(data, geom = "histogram")
# where
data <- c(-3085343786.21786, -2573821227.61665, -3020053924.67167,
-2780832244.26526,
374092942.376734, -1503979297.33063, 1151317429.38695,
-2812670351.35645,
-111395725.437895, 1860448400.08500, -27044548.279974,
11234805264.8071,
2184374733.36106, 2597009850.83817, -2937243790.56636,
3950459474.09184,
6332683775.6722, 1266882290.47123, -2858090763.63565,
3083624729.87412,
-2054146868.81874, 23553452.7770443, -223586782.086373,
-3048660089.66220,
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-394828138.611244,
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4011935846.83255,
-514826249.663561, -587330738.626301, -3438052333.463,
1621293868.80563,
2992047498.75096, 1982942498.91354, 2830588537.81410,
1016024131.11629,
3267850337.42599, -3196711079.315, -2938848965.35894,
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1141798756.91945,
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1079507788.96153,
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qplot(data, geom = "histogram")
Ben Bolker
Jan 16, 2011, 9:38:09 PM1/16/11
to ggp...@googlegroups.com
For whatever it's worth in debugging this,
qplot(c(-1e9,1e9),geom="histogram") ## works
qplot(c(-1e10,1e10),geom="histogram") ## fails
is a more easily reproducible example.
Joshua Wiley
Jan 16, 2011, 10:20:24 PM1/16/11
to ggp...@googlegroups.com, Ben Bolker, Trevor L Davis
Hi,
@ Trevor, you can get around this by specifying the binwidth argument.
Given the huge values you are working with, I would use a large
number (e.g., 10^5) or it could take a long time. Alternately, use
smaller numbers.
@ Dr. Bolker, thanks for the easy example.
I think this comes down to floating point precision issues for numbers
of this size in the default cutting/binning code. The actual test is
in position-collide.r ~~ line 40. Relaxing the test on the standard
deviation of the widths (xmax - xmin for each bar), also "fixes" the
problem.
Cheers,
Josh
On Sun, Jan 16, 2011 at 6:38 PM, Ben Bolker <bbo...@gmail.com> wrote:
> For whatever it's worth in debugging this,
>
> qplot(c(-1e9,1e9),geom="histogram") ## works
> qplot(c(-1e10,1e10),geom="histogram") ## fails
>
> is a more easily reproducible example.
>
> On 11-01-16 09:24 PM, Trevor L Davis wrote:
>> Today when making histograms in ggplot2 (using a freshly installed
>> version from CRAN) I got the following error: "position_stack requires
>> constant width". How do I fix the problem? Here is a reproducible
>> example (sorry for the big 1000 number data set, I'm doing charts
>> involving randomly generated numbers and ggplot2 only fails some of
>> the time so I just grabbed the numbers from the last time it failed).
>>
>> Thanks!
>>
>> Trevor Davis
>> Stanford (Dept of Economics)
[snip]
--
Joshua Wiley
Ph.D. Student, Health Psychology
University of California, Los Angeles
http://www.joshuawiley.com/
Hadley Wickham
Jan 16, 2011, 11:06:07 PM1/16/11
to Joshua Wiley, ggp...@googlegroups.com, Ben Bolker, Trevor L Davis
> I think this comes down to floating point precision issues for numbers
> of this size in the default cutting/binning code. The actual test is
> in position-collide.r ~~ line 40. Relaxing the test on the standard
> deviation of the widths (xmax - xmin for each bar), also "fixes" the
> problem.
> of this size in the default cutting/binning code. The actual test is
> in position-collide.r ~~ line 40. Relaxing the test on the standard
> deviation of the widths (xmax - xmin for each bar), also "fixes" the
> problem.
I wish someone with real knowledge of FP issues could give me some
guidance with these thresholds. I know just enough to be dangerous :(
Hadley
--
Assistant Professor / Dobelman Family Junior Chair
Department of Statistics / Rice University
http://had.co.nz/
Trevor Davis
Jan 17, 2011, 1:39:57 AM1/17/11
to Joshua Wiley, ggp...@googlegroups.com
Josh,
Thanks for pinning down the problem. I'll try to feed ggplot2 smaller numbers for this application.
Thanks!
Trevor
Thanks for pinning down the problem. I'll try to feed ggplot2 smaller numbers for this application.
Thanks!
Trevor
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