Hello, I have been trying to use msaplot like this:
library(ggtree)
MyTree <- read.tree("tree.newick") #check
fasta <- read.fasta("mydata.fasta", package="ggtree")
msaplot(p=ggtree(MyTree), fasta="mydata.fasta")
## Then I'm getting this error and I'm not finding information about it.
Error in ladderize(MyTree, right = FALSE) : object 'node_depth' not found
Thanks in advance.