Re: [Gfs-devel] gfsview installation problem

[Justin Goldsmith]

I should specify that I'm installing from source on Fedora 23

Thanks,

Justin D Goldsmith

IT Manager

Center for Space Plasma and Aeronomic Research

Office: CRH2007  -  Phone: 256-961-7787

On Wed, Aug 31, 2016 at 2:56 PM, Justin Goldsmith <jdg...@uah.edu> wrote:

Hi guys, I just signed up for this list, so I hope I'm asking the right list about this.

I've got the whole gerris suite installed except for gfsview. When I try to run ./configure, this is my readout:

---------------------------------

[root@2014lab4 gfsview-snapshot-121130]# ./configure 

checking build system type... x86_64-unknown-linux-gnu

checking host system type... x86_64-unknown-linux-gnu

checking for a BSD-compatible install... /usr/bin/install -c

checking whether build environment is sane... yes

checking for a thread-safe mkdir -p... /usr/bin/mkdir -p

checking for gawk... gawk

checking whether make sets $(MAKE)... yes

checking whether to enable maintainer-specific portions of Makefiles... no

checking for mpicc... no

checking for style of include used by make... GNU

checking for gcc... gcc

checking whether the C compiler works... yes

checking for C compiler default output file name... a.out

checking for suffix of executables... 

checking whether we are cross compiling... no

checking for suffix of object files... o

checking whether we are using the GNU C compiler... yes

checking whether gcc accepts -g... yes

checking for gcc option to accept ISO C89... none needed

checking dependency style of gcc... gcc3

checking for library containing strerror... none required

checking for gcc... (cached) gcc

checking whether we are using the GNU C compiler... (cached) yes

checking whether gcc accepts -g... (cached) yes

checking for gcc option to accept ISO C89... (cached) none needed

checking dependency style of gcc... (cached) gcc3

checking for gcc... (cached) gcc

checking whether we are using the GNU C compiler... (cached) yes

checking whether gcc accepts -g... (cached) yes

checking for gcc option to accept ISO C89... (cached) none needed

checking dependency style of gcc... (cached) gcc3

checking whether gcc and cc understand -c and -o together... yes

checking how to run the C preprocessor... gcc -E

checking for grep that handles long lines and -e... /usr/bin/grep

checking for egrep... /usr/bin/grep -E

checking for ANSI C header files... yes

checking how to print strings... printf

checking for a sed that does not truncate output... /usr/bin/sed

checking for fgrep... /usr/bin/grep -F

checking for ld used by gcc... /usr/bin/ld

checking if the linker (/usr/bin/ld) is GNU ld... yes

checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B

checking the name lister (/usr/bin/nm -B) interface... BSD nm

checking whether ln -s works... yes

checking the maximum length of command line arguments... 1572864

checking whether the shell understands some XSI constructs... yes

checking whether the shell understands "+="... yes

checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop

checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop

checking for /usr/bin/ld option to reload object files... -r

checking for objdump... objdump

checking how to recognize dependent libraries... pass_all

checking for dlltool... dlltool

checking how to associate runtime and link libraries... printf %s\n

checking for ar... ar

checking for archiver @FILE support... @

checking for strip... strip

checking for ranlib... ranlib

checking command to parse /usr/bin/nm -B output from gcc object... ok

checking for sysroot... no

checking for mt... no

checking if : is a manifest tool... no

checking for sys/types.h... yes

checking for sys/stat.h... yes

checking for stdlib.h... yes

checking for string.h... yes

checking for memory.h... yes

checking for strings.h... yes

checking for inttypes.h... yes

checking for stdint.h... yes

checking for unistd.h... yes

checking for dlfcn.h... yes

checking for objdir... .libs

checking if gcc supports -fno-rtti -fno-exceptions... no

checking for gcc option to produce PIC... -fPIC -DPIC

checking if gcc PIC flag -fPIC -DPIC works... yes

checking if gcc static flag -static works... no

checking if gcc supports -c -o file.o... yes

checking if gcc supports -c -o file.o... (cached) yes

checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes

checking whether -lc should be explicitly linked in... no

checking dynamic linker characteristics... GNU/Linux ld.so

checking how to hardcode library paths into programs... immediate

checking whether stripping libraries is possible... yes

checking if libtool supports shared libraries... yes

checking whether to build shared libraries... yes

checking whether to build static libraries... yes

checking for pkg-config... /usr/bin/pkg-config

checking pkg-config is at least version 0.9.0... yes

checking for GERRIS2D... yes

checking for GERRIS3D... yes

checking for OSMESA... yes

checking for GTK... no

configure: WARNING: GTK dependencies not met.

checking for FTGL... no

configure: WARNING: FTGL dependencies not met.

configure: creating ./config.status

config.status: creating Makefile

config.status: creating view/Makefile

config.status: creating view/desktop/Makefile

config.status: creating gl2ps/Makefile

config.status: creating gl/Makefile

config.status: creating batch/Makefile

config.status: creating debian/Makefile

config.status: creating config.h

config.status: config.h is unchanged

config.status: executing depfiles commands

config.status: executing libtool commands

[root@2014lab4 gfsview-snapshot-121130]#

---------------------------------

Then when I try and make, this is what happens

---------------------------------

[root@2014lab4 gfsview-snapshot-121130]# make

make  all-recursive

make[1]: Entering directory '/home/jgoldsmith/Downloads/gfsview-snapshot-121130'

Making all in gl2ps

make[2]: Entering directory '/home/jgoldsmith/Downloads/gfsview-snapshot-121130/gl2ps'

make[2]: Nothing to be done for 'all'.

make[2]: Leaving directory '/home/jgoldsmith/Downloads/gfsview-snapshot-121130/gl2ps'

Making all in gl

make[2]: Entering directory '/home/jgoldsmith/Downloads/gfsview-snapshot-121130/gl'

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -DPACKAGE_DATA_DIR=\""/usr/local/share/gfsview"\" -DPACKAGE_LOCALE_DIR=\""/usr/local//locale"\" -DG_LOG_DOMAIN=\"GfsGl\" -I..    -DFTT_2D=1 -pthread -I/usr/local/include -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include   -g -O2 -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -D_XOPEN_SOURCE=500 -MT libgfsgl2D_la-gfsgl.lo -MD -MP -MF .deps/libgfsgl2D_la-gfsgl.Tpo -c -o libgfsgl2D_la-gfsgl.lo `test -f 'gfsgl.c' || echo './'`gfsgl.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -DPACKAGE_DATA_DIR=\"/usr/local/share/gfsview\" -DPACKAGE_LOCALE_DIR=\"/usr/local//locale\" -DG_LOG_DOMAIN=\"GfsGl\" -I.. -DFTT_2D=1 -pthread -I/usr/local/include -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -g -O2 -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -D_XOPEN_SOURCE=500 -MT libgfsgl2D_la-gfsgl.lo -MD -MP -MF .deps/libgfsgl2D_la-gfsgl.Tpo -c gfsgl.c  -fPIC -DPIC -o .libs/libgfsgl2D_la-gfsgl.o

gfsgl.c:56:22: fatal error: GL/glu.h: No such file or directory

compilation terminated.

Makefile:358: recipe for target 'libgfsgl2D_la-gfsgl.lo' failed

make[2]: *** [libgfsgl2D_la-gfsgl.lo] Error 1

make[2]: Leaving directory '/home/jgoldsmith/Downloads/gfsview-snapshot-121130/gl'

Makefile:335: recipe for target 'all-recursive' failed

make[1]: *** [all-recursive] Error 1

make[1]: Leaving directory '/home/jgoldsmith/Downloads/gfsview-snapshot-121130'

Makefile:264: recipe for target 'all' failed

make: *** [all] Error 2

[root@2014lab4 gfsview-snapshot-121130]#

---------------------------------

Then of course, make install fails as well

---------------------------------

[root@2014lab4 gfsview-snapshot-121130]# make install

Making install in gl2ps

make[1]: Entering directory '/home/jgoldsmith/Downloads/gfsview-snapshot-121130/gl2ps'

make[2]: Entering directory '/home/jgoldsmith/Downloads/gfsview-snapshot-121130/gl2ps'

make[2]: Nothing to be done for 'install-exec-am'.

make[2]: Nothing to be done for 'install-data-am'.

make[2]: Leaving directory '/home/jgoldsmith/Downloads/gfsview-snapshot-121130/gl2ps'

make[1]: Leaving directory '/home/jgoldsmith/Downloads/gfsview-snapshot-121130/gl2ps'

Making install in gl

make[1]: Entering directory '/home/jgoldsmith/Downloads/gfsview-snapshot-121130/gl'

/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -DPACKAGE_DATA_DIR=\""/usr/local/share/gfsview"\" -DPACKAGE_LOCALE_DIR=\""/usr/local//locale"\" -DG_LOG_DOMAIN=\"GfsGl\" -I..    -DFTT_2D=1 -pthread -I/usr/local/include -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include   -g -O2 -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -D_XOPEN_SOURCE=500 -MT libgfsgl2D_la-gfsgl.lo -MD -MP -MF .deps/libgfsgl2D_la-gfsgl.Tpo -c -o libgfsgl2D_la-gfsgl.lo `test -f 'gfsgl.c' || echo './'`gfsgl.c

libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -DPACKAGE_DATA_DIR=\"/usr/local/share/gfsview\" -DPACKAGE_LOCALE_DIR=\"/usr/local//locale\" -DG_LOG_DOMAIN=\"GfsGl\" -I.. -DFTT_2D=1 -pthread -I/usr/local/include -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -g -O2 -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -D_XOPEN_SOURCE=500 -MT libgfsgl2D_la-gfsgl.lo -MD -MP -MF .deps/libgfsgl2D_la-gfsgl.Tpo -c gfsgl.c  -fPIC -DPIC -o .libs/libgfsgl2D_la-gfsgl.o

gfsgl.c:56:22: fatal error: GL/glu.h: No such file or directory

compilation terminated.

Makefile:358: recipe for target 'libgfsgl2D_la-gfsgl.lo' failed

make[1]: *** [libgfsgl2D_la-gfsgl.lo] Error 1

make[1]: Leaving directory '/home/jgoldsmith/Downloads/gfsview-snapshot-121130/gl'

Makefile:335: recipe for target 'install-recursive' failed

make: *** [install-recursive] Error 1

[root@2014lab4 gfsview-snapshot-121130]#

---------------------------------

Any help or recommendations you might have would be greatly appreciated.

Thanks,

Justin D Goldsmith

IT Manager

Center for Space Plasma and Aeronomic Research

Office: CRH2007  -  Phone: 256-961-7787

[Justin Goldsmith]

[Stephane Popinet]

Hi Justin,

Several required libraries are missing/badly configured on your system:

> checking for OSMESA... yes
> checking for GTK... no
> configure: WARNING: GTK dependencies not met.

You will only have gfsview-batch, not gfsview (which requires GTK for
the graphical interface).

> checking for FTGL... no
> configure: WARNING: FTGL dependencies not met.

You won't have "text" objects in gfsview.

> gfsgl.c:56:22: fatal error: GL/glu.h: No such file or directory
> compilation terminated.

OpenGL/Mesa is not installed/configured properly on your system.

hope this helps

Stephane

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[Justin Goldsmith]

Any idea what the names of the packages are for those dependencies for Fedora 23 (through either dnf or a manual download)? I thought I had them installed, but it may be the wrong versions or wrong packages in general.

Thanks,

Justin D Goldsmith

IT Manager

Center for Space Plasma and Aeronomic Research

Office: CRH2007  -  Phone: 256-961-7787

[Justin Goldsmith]

I have ftgl and several versions of gtk installed. Is gfsview dependent on specific versions of these?

checking for pkg-config... /usr/bin/pkg-config

checking pkg-config is at least version 0.9.0... yes

checking for GERRIS2D... yes

checking for GERRIS3D... yes

checking for OSMESA... yes

checking for GTK... no

configure: WARNING: GTK dependencies not met.

checking for FTGL... no

configure: WARNING: FTGL dependencies not met.

configure: creating ./config.status

config.status: creating Makefile

config.status: creating view/Makefile

config.status: creating view/desktop/Makefile

config.status: creating gl2ps/Makefile

config.status: creating gl/Makefile

config.status: creating batch/Makefile

config.status: creating debian/Makefile

config.status: creating config.h

config.status: config.h is unchanged

config.status: executing depfiles commands

config.status: executing libtool commands

[root@2014lab4 gfsview-snapshot-121130]# dnf install gtk1 gtk2 gtk3 ftgl

Last metadata expiration check: 0:24:56 ago on Fri Sep 16 09:26:13 2016.

Package gtk+-1:1.2.10-82.fc24.x86_64 is already installed, skipping.

Package gtk2-2.24.31-1.fc24.x86_64 is already installed, skipping.

Package gtk3-3.20.9-1.fc24.x86_64 is already installed, skipping.

Package ftgl-2.1.3-0.14.rc5.fc24.x86_64 is already installed, skipping.

Dependencies resolved.

Nothing to do.

Complete!

Thanks,

Justin D Goldsmith

IT Manager

Center for Space Plasma and Aeronomic Research

Office: CRH2007  -  Phone: 256-961-7787

[Vladimir Kolobov]

Justin,

we use the latest version of gtk:

gtkglext-1.2.0.tar.bz2.

All the best,

Vladimir