[vigente/gerardus] 4a8eb1: Delete old stuff

[Ramón Casero]

Branch: refs/heads/papers
Home: https://github.com/vigente/gerardus
Commit: 4a8eb1e114ffb310c60e212261398ab0e112d5e8
https://github.com/vigente/gerardus/commit/4a8eb1e114ffb310c60e212261398ab0e112d5e8
Author: Ramón Casero <rca...@gmail.com>
Date: 2017-04-04 (Tue, 04 Apr 2017)

Changed paths:
R casero2015_3d_histology_diffusion_registration/ChangeLog
R casero2015_3d_histology_diffusion_registration/src/CardiacToolbox/blockface_correct_frame_shifts.m
R casero2015_3d_histology_diffusion_registration/src/CardiacToolbox/blockface_correct_perspective.m
R casero2015_3d_histology_diffusion_registration/src/CardiacToolbox/blockface_create_masks.m
R casero2015_3d_histology_diffusion_registration/src/CardiacToolbox/blockface_equalise_illumination.m
R casero2015_3d_histology_diffusion_registration/src/CardiacToolbox/blockface_intraframe_reg.m
R casero2015_3d_histology_diffusion_registration/src/CardiacToolbox/histology_blockface_preprocessing.m
R casero2015_3d_histology_diffusion_registration/src/CardiacToolbox/histology_preprocessing.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix_affine_matrix2struct.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix_affine_struct2matrix.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix_bspline_grid.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix_bspline_grid2param.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix_cat.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix_colon.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix_compose_afftransf.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix_delete_param_file.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix_length.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix_read_file2param.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix_read_reg_output.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/elastix_write_param2file.m
R casero2015_3d_histology_diffusion_registration/src/ElastixToolbox/transformix.m
R casero2015_3d_histology_diffusion_registration/src/FileFormatToolbox/match_file_lists.m
R casero2015_3d_histology_diffusion_registration/src/FileFormatToolbox/scimat_im2scimat.m
R casero2015_3d_histology_diffusion_registration/src/FileFormatToolbox/scimat_imagesc.m
R casero2015_3d_histology_diffusion_registration/src/FileFormatToolbox/scimat_index2world.m
R casero2015_3d_histology_diffusion_registration/src/FileFormatToolbox/scimat_load.m
R casero2015_3d_histology_diffusion_registration/src/FileFormatToolbox/scimat_save.m
R casero2015_3d_histology_diffusion_registration/src/FileFormatToolbox/scimat_seg3d2matlab.m
R casero2015_3d_histology_diffusion_registration/src/FileFormatToolbox/scimat_tiff2scimat.m
R casero2015_3d_histology_diffusion_registration/src/FileFormatToolbox/scimat_world2index.m
R casero2015_3d_histology_diffusion_registration/src/FileFormatToolbox/writemetaimagefile.m
R casero2015_3d_histology_diffusion_registration/src/FiltersToolbox/imcmass.m
R casero2015_3d_histology_diffusion_registration/src/FiltersToolbox/scimat.m
R casero2015_3d_histology_diffusion_registration/src/FiltersToolbox/scimat_squeeze.m
R casero2015_3d_histology_diffusion_registration/src/LICENCE
R casero2015_3d_histology_diffusion_registration/src/README
R casero2015_3d_histology_diffusion_registration/src/RegistrationToolbox/regmatchedfilt.m
R casero2015_3d_histology_diffusion_registration/src/RegistrationToolbox/transfdiff.m
R casero2015_3d_histology_diffusion_registration/src/RegistrationToolbox/transfdiffreg.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/Conv2FFTToolbox/conv_fft2.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/Conv2FFTToolbox/exindex.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/Conv2FFTToolbox/license.txt
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/ImageSelection.class
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/ImageSelection.java
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/LICENSE
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/README.md
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/append_pdfs.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/copyfig.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/crop_borders.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/eps2pdf.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/export_fig.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/fix_lines.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/ghostscript.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/im2gif.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/isolate_axes.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/pdf2eps.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/pdftops.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/print2array.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/print2eps.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/read_write_entire_textfile.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/user_string.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/ExportFigureToolbox/using_hg2.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/TiffreadToolbox/image_background.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/TiffreadToolbox/image_histogram.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/TiffreadToolbox/show_image.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/TiffreadToolbox/show_stack.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/TiffreadToolbox/tiffread.m
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/license-rotateXLabels.txt
R casero2015_3d_histology_diffusion_registration/src/ThirdPartyToolbox/rotateXLabels.m
R casero2015_3d_histology_diffusion_registration/src/aux_histology2blockface.m
R casero2015_3d_histology_diffusion_registration/src/basic_bspline_params.txt
R casero2015_3d_histology_diffusion_registration/src/diffusion.nb
R casero2015_3d_histology_diffusion_registration/src/grab_src_code_dependencies.m
R casero2015_3d_histology_diffusion_registration/src/hand_tracing/BlockfaceMasks.mat
R casero2015_3d_histology_diffusion_registration/src/hand_tracing/BlockfaceScratchAngle_55_90.mat
R casero2015_3d_histology_diffusion_registration/src/hand_tracing/BlockfaceStabilisedLandmarks_55_90.mat
R casero2015_3d_histology_diffusion_registration/src/hand_tracing/pts_HistologySiriusRedLoRes_to_Blockface.mat
R casero2015_3d_histology_diffusion_registration/src/hand_tracing/pts_Intra_HistologySiriusRedLoRes.mat
R casero2015_3d_histology_diffusion_registration/src/histology_blockface_mouse.m
R casero2015_3d_histology_diffusion_registration/src/histology_noblockface_mouse.m
R casero2015_3d_histology_diffusion_registration/src/histology_refinement_only_diffusion.m
R casero2015_3d_histology_diffusion_registration/src/histology_refinement_without_diffusion.m
R casero2015_3d_histology_diffusion_registration/src/manual_landmarks.m
R casero2015_3d_histology_diffusion_registration/src/paper_figures.m
R casero2015_3d_histology_diffusion_registration/src/regParam-bspline-gray-intrahisto.txt
R casero2015_3d_histology_diffusion_registration/src/regParam-bspline-intrahisto.txt
R casero2015_3d_histology_diffusion_registration/src/regParam-bspline-multilevel-intrahisto.txt
R casero2015_3d_histology_diffusion_registration/src/regParam-rigid.txt
R casero2015_3d_histology_diffusion_registration/src/regParamIntra-affine.txt
R casero2015_3d_histology_diffusion_registration/src/regParamIntra-rigid.txt
R casero2015_3d_histology_diffusion_registration/src/results/HistologySiriusRedLoRes_1st_bspline_intra_reg.mat
R casero2015_3d_histology_diffusion_registration/src/results/err_Q53_blockface_histology_t_IntraNoDiff_HistologySiriusRedLoRes.mat
R casero2015_3d_histology_diffusion_registration/src/results/err_Q53_blockface_histology_t_IntraOnlyDiff_HistologySiriusRedLoRes.mat
R casero2015_3d_histology_diffusion_registration/src/results/err_Q53_blockface_histology_t_Intra_HistologySiriusRedLoRes.mat
R casero2015_3d_histology_diffusion_registration/src/results/err_Q53_blockface_histology_t_NoBlockfaceIntra_HistologySiriusRedLoRes.mat
R casero2015_3d_histology_diffusion_registration/src/results/err_Q53_intra_histology_t_IntraNoDiff_HistologySiriusRedLoRes.mat
R casero2015_3d_histology_diffusion_registration/src/results/err_Q53_intra_histology_t_IntraOnlyDiff_HistologySiriusRedLoRes.mat
R casero2015_3d_histology_diffusion_registration/src/results/err_Q53_intra_histology_t_Intra_HistologySiriusRedLoRes.mat
R casero2015_3d_histology_diffusion_registration/src/results/err_Q53_intra_histology_t_NoBlockfaceIntra_HistologySiriusRedLoRes.mat
R casero2015_3d_histology_diffusion_registration/src/results/results-bspline-correction-25-diffusion-4-bspline-iter.mat
R casero2015_3d_histology_diffusion_registration/src/results/results-bspline-correction-max-diffusion-1-bspline-iter.mat
R casero2015_3d_histology_diffusion_registration/src/toy_examples.m
R casero2015_3d_histology_diffusion_registration/src/validate_reconstruction.m
R casero2015_3d_histology_diffusion_registration/src/validate_reconstruction_noblockface.m
R casero2015_3d_histology_diffusion_registration/src/validate_reconstruction_onlydiff.m

Log Message:
-----------
Delete old stuff


Commit: 69a7ced30b2ddcc97bc22c25c2f660acea60f82d
https://github.com/vigente/gerardus/commit/69a7ced30b2ddcc97bc22c25c2f660acea60f82d
Author: Ramón Casero <rca...@gmail.com>
Date: 2017-04-04 (Tue, 04 Apr 2017)

Changed paths:
A casero2015_3d_histology_diffusion_registration/README.md

Log Message:
-----------
point to where the code is now


Compare: https://github.com/vigente/gerardus/compare/030c26f3cc07...69a7ced30b2d