GenePattern Help Forum

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Welcome to the GenePattern help forum. This is a place to get help from GenePattern team members and fellow GenePattern users and also a place to post anything you've found useful in using GenePattern.

More information about GenePattern can be found at https://genepattern.org, where you can also sign up to follow us on Facebook and Twitter.

Happy posting!

-The GenePattern team

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Jibin Zhang, Barbara Hill2

7/31/20

Q&A

Question on the CNV analysis of Affymetrix cytoscan HD

Hello Jibin, Unfortunately, the CopyNumberInferencePipeline is no longer supported. I'm sorry we

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Question on the CNV analysis of Affymetrix cytoscan HD

Hello Jibin, Unfortunately, the CopyNumberInferencePipeline is no longer supported. I'm sorry we

7/31/20

Dmitri Bi, Barbara Hill2

1/13/20

Q&A

Issues on GISTIC of GenePattern

Hello Dmitri, I'm so sorry that you've not received any help yet. Are you still having

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Issues on GISTIC of GenePattern

Hello Dmitri, I'm so sorry that you've not received any help yet. Are you still having

1/13/20

Sandra Romero, Barbara Hill2

1/14/19

Q&A

Copy number analysis

Hello Sandra, Unfortunately, this pipeline is unable to be run in the cloud due to its use of

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Hello Sandra, Unfortunately, this pipeline is unable to be run in the cloud due to its use of

1/14/19