Error in DESeq2

24 views
Skip to first unread message

Sruthi S

unread,
Jun 14, 2022, 9:16:46 AM6/14/22
to genepatt...@googlegroups.com
Hi sir,
I have been trying to run the DESeq2 module. But it is showing an error. I have attached the stderr.txt with this email. Kindly check and help me find a solution.

Thank you,
Sruthi S

Mailtrack Sender notified by
Mailtrack
06/14/22, 06:43:51 PM
stderr.txt

Ted Liefeld

unread,
Jun 14, 2022, 9:43:12 AM6/14/22
to GenePattern Help Forum
Hi

we are currently working to diagnose the problems with the DESeq2 module.  We will update you this thread when we have implemented a fix.

Thanks for your patience,

Ted

Sruthi S

unread,
Jun 14, 2022, 11:06:01 AM6/14/22
to genepatt...@googlegroups.com
Ok, thank you!

Sruthi



Mailtrack Sender notified by
Mailtrack
06/14/22, 08:35:09 PM

--
You received this message because you are subscribed to the Google Groups "GenePattern Help Forum" group.
To unsubscribe from this group and stop receiving emails from it, send an email to genepattern-he...@googlegroups.com.
To view this discussion on the web visit https://groups.google.com/d/msgid/genepattern-help/c15142a9-a129-42b3-91f2-1ade74bbe158n%40googlegroups.com.

Ted Liefeld

unread,
Jun 24, 2022, 2:03:23 PM6/24/22
to GenePattern Help Forum
Hi

We have just deployed a new container for the DESeq2 module and we believe it should be working properly now.  Please feel free to try it and let us know if you have any problems.

Thanks for your patience,

Ted

Reply all
Reply to author
Forward
0 new messages