Job id: 604988 - Error

[ravi]

Hi,

I used normalised total gene count from DESeq2 as the input for DiSCoVER module and it returned an error.

Could you please suggest what the error means and how I could rectify to move forward?

Job id: 604988

I eagerly wait for your suggestion.

Thank you,

Ravi.

[Ted Liefeld]

Ravi,

based off the error it looks like the csv files are possibly corrupted or are somehow incompatible with the code.  To test this I opened them in Excel (no problems, on a mac) and resaved them as csv files.  Diffing them showed a difference on the first line but I could not figure out what the issue was using my usual tools to show non-printable characters in a file.

I am happy to report however that the new files  ran without error though.  So I would suggest opening and resaving them using excel and trying again.  If that still fails I can send you the versions I resaved to try.

Hope this helps

Ted