data sources for gene mania?

4 views
Skip to first unread message

Sternberg, Paul W.

unread,
Dec 19, 2018, 7:32:29 PM12/19/18
to genemani...@googlegroups.com
Hello team,
I cannot find the data sources for GeneMania listed on your site. If not shown, please put them somewhere.
(I was trying to document that Alliance/MOD data were being used by cool Apps!_
thanks
Paul

Paul W. Sternberg
Bren Professor of Biology 
Division of Biology and Biological Engineering,156-29, Caltech
1200 E. Calif Blvd., Pasadena CA 91125
tel 626-395-2181    fax 626-568-8012    email p...@caltech.edu
Lab Manager Sarah Torres  626-395-3990  tor...@caltech.edu
Lab webpage:  http://wormlab.caltech.edu
Alliance of Genome Resources: http://www.alliancegenome.org/
WormBase:      http://www.wormbase.org
Gene Ontology Consortium: http://www.geneontology.org
MicroPublication Project: http://www.micropublicationbiology.org/
Literature Search Engine:  http://www.textpresso.org







Quaid Morris

unread,
Dec 20, 2018, 9:46:57 AM12/20/18
to genemani...@googlegroups.com
Hi Paul,
What’s missing that you were looking for?

--
You received this message because you are subscribed to the Google Groups "genemania-discuss" group.
To unsubscribe from this group and stop receiving emails from it, send an email to genemania-disc...@googlegroups.com.
For more options, visit https://groups.google.com/d/optout.
--
Quaid Morris, PhD
Professor, The Donnelly Centre
Departments of Molecular Genetics and Computer Science
Senior Investigator, Ontario Institute for Cancer Research
CIFAR AI Chair, Vector Institute

Gary Bader

unread,
Dec 20, 2018, 4:27:25 PM12/20/18
to genemani...@googlegroups.com, Sternberg, Paul W.
Hi Paul - we do list network data sources at http://pages.genemania.org/help/#network-data-sources but we should also list GO annotations that we collect - we may be getting these from ensebl, but ultimately, of course they are from MODs. We also link out to MODs. Currently we're not pulling network data from MODs, mainly for historical reasons, but we should probably look into opportunities for that in the future.

Best,
Gary
Reply all
Reply to author
Forward
0 new messages