LMM fails

[PJ]

Hello

I am running GEMMA LMM with the following command:

sbatch -n 1 --mem-per-cpu=10000 --time=12:00:00 --wrap='/cluster/home/posingh/gemma/bin/gemma -bfile all.SNPs.filt2.colour.imp -k ./output/all.SNPs.filt2.colour.imp.cXX.txt  -n 1 -lmm 4 -o all.SNPs.filt2.colour.imp.lmm.colour.YF'

I attach my .fam file with the phenotypes.

However, it crashes with the following error. Any suggestions? 

GEMMA 0.97 (2017/12/19) by Xiang Zhou and team (C) 2012-2017

Reading Files ... 

## number of total individuals = 349

## number of analyzed individuals = 312

## number of covariates = 1

## number of phenotypes = 1

## number of total SNPs/var        =  4377491

## number of analyzed SNPs         =  4377435

Start Eigen-Decomposition...

pve estimate =0.999969

se(pve) =0.000642147

gemma: src/lmm.cpp:401: double LogL_f(double, void*): Assertion `!is_nan(f)' failed.

Aborted