Friday Asilomar schedule
Jason Stajich
speaking. If I missed your email about being interested in speaking,
let me know.
We could have one more speaker or just use the extra time to have the
discussion.
Rodolfo also mentioned an interest in having Galaxy instance for fungal
genomes and we can discuss that. We are working to have centralized
copy of genomes and annotation in one place with systematic and unique
names for chromosomes, genes, and proteins across all of the data to
make the analyses easier. A single place to get this data is an
achievable goal, though keeping up to date on who and what is sequenced
and when it is released is a more difficult thing I had hoped would
accomplished by the GOLD database.
I hope this can be something we can work towards as well and this can
then encourage analysis provides to upload all of the data en-masse in
sites that want to host analysis tools like Galaxy, MG-RAST, CoGE, etc.
Fungal Genome Tools
During Fungal Genetics 2011 Asilomar Meeting
When: Friday March 18, 2011; 12:15PM - 2:45 PM
Where: Location: TBA
Suggested format: 12 min talks with 8 min of discussion.
Schedule
12-12:20 Boxed lunches in room
12:20 - 12:40 SGD/CGD/AspGD (Martha Arnaud; Stacy Engel; or Gail Binkley)
12:40 - 1:00 Mycocosm - Igor Grigoriev (JGI)
1:00 - 1:20 FungiDB - Jason Stajich (UC Riverside)
1:20 - 1:40 Comparative Fungal Genomics Platform - Yong-Hwan Lee
(Seoul National University)
1:40 - 2:00 MicrobesOnline Fungal Genomics resource (Paramvir Dehal)
2:00 - 2:20
2:20 - 2:45 - Discussion and wrapup
- Discussion topics: A hosted Galaxy instance?
- Curation
- Funding
--
Jason E Stajich, PhD
Assistant Professor
Dept of Plant Pathology & Microbiology
University of California, Riverside
951.827.2363
http://lab.stajich.org http://fungalgenomes.org twitter:stajichlab
http://plantpathology.ucr.edu http://genomics.ucr.edu