Obtaining additional scRNA data

12 views
Skip to first unread message

Camille Williams

unread,
Jun 16, 2025, 11:10:57 AM6/16/25
to FUMA GWAS users
Dear FUMA Developers, 

Thank you for providing the preprocessed single-cell RNA datasets on your GitHub repository, which allows us to run the analyses locally!

We have noticed that the preprocessed folder currently does not include data for the Adult Human Brain or GSE168408 Human Prefrontal Cortex datasets you describe here: https://fuma.ctglab.nl/tutorial#datasets:~:text=Data%20name,Description 

Would it be possible for you to share the preprocessed versions of these datasets?

Thank you very much for your time and support!

Best,

Camille Williams 
Post-doctoral Fellow 
Laboratoire de Sciences Cognitives et Psycholinguistique
Ecole Normale Supérieure, Paris, France  

Tanya Phung

unread,
Jun 16, 2025, 11:29:24 AM6/16/25
to FUMA GWAS users
Hi Camille, 

I will try to upload the newly processed scRNAseq datasets to the FUMA site soon. Please expect a few weeks for this. If you urgently need it, please send me an email (you can look up my email address on the CTG website). 

Best,
Tanya

Camille Williams

unread,
Jul 1, 2025, 1:19:18 PM7/1/25
to FUMA GWAS users
Hi Tanya, thanks for your reply. I sent you an email! 
Best,
Camille 

Reply all
Reply to author
Forward
0 new messages