ERROR: 1 Input file format was not correct

[macl...@gmail.com]

First of all. Sorry gusy for posting this error again, so it has been posted so many times. But, even if I have been reading thorugh, I did not get it solved.

I filtered my dataframe in R and I created a txt file from it. I show the code:

write.table(procGWAScommOne, file = "GWAScommOne.txt", col.names = T, row.names = F, sep = "\t") # I tried to use a simple sep = "", and it did not work out either

This is the txt structure I am submitting in FUMA.

"CHR"    "BP"    "A1"    "A2"    "pval"    "OR"    "Beta"    "SE"    "N"
"11"    "44373635"    "T"    "C"    "0.7332"    "0.4377"    "0.0064"    "0.0188"    27693
"2"    "238487850"    "A"    "G"    "0.4902"    "0.7391"    "0.0138"    "0.02"    482730
"3"    "175336833"    "A"    "G"    "0.349"    "0.7845"    "0.0193"    "0.0207"    482730
"10"    "48369749"    "T"    "C"    "0.8575"    "0.3395"    "-0.0037"    "0.0205"    25556
"18"    "59012796"    "A"    "G"    "0.196"    "0.4572"    "-0.0279"    "0.0216"    471013
"6"    "165765833"    "T"    "C"    "0.8268"    "0.3791"    "0.0039"    "0.0178"    482730
"6"    "42399074"    "T"    "C"    "0.3118"    "0.2761"    "-0.0211"    "0.0208"    27693
"5"    "53816782"    "T"    "C"    "0.4062"    "0.4539"    "-0.014"    "0.0168"    482730

After so many tries, I am getting the same error

Kind regards.

[d.p.wi...@vu.nl]

Hello,

Maybe it is due to the quotes. Try "write.table(procGWAScommOne, file = "GWAScommOne.txt", col.names = T, row.names = F, sep = "\t", quote=F)".

Cheers,

Doug

[macl...@gmail.com]

Yes, It was.

It is running already.

Cheers,

Alex