Seeking Help with FUMA SNP2GENE Error 006 (Job ID: 686156)

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qiu Qiu

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Dec 8, 2025, 9:26:08 PM12/8/25

to FUMA GWAS users

Dear FUMA Team,

Hello!

My name is Qiu. I have been trying to run some GWAS summary statistics using the SNP2GENE function, but I keep encountering "ERROR: 006," which prevents the job from completing. The most recent job ID is 686156.

I have carefully checked my input file for common issues, including ensuring there are no missing values, verifying the data format, confirming there are no duplicate rsIDs, and making sure the file is properly tab-delimited with correct column headers. Despite these checks, the error persists, and I am unable to pinpoint the cause.

For reference, I have already emailed my summary statistics file to the official FUMA email address.

Could you please help me identify what might be causing this error? Any guidance or insight into resolving "ERROR: 006" would be greatly appreciated.

Thank you so much for your time and assistance.

Best regards,
Qiu

Tanya Phung

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Dec 12, 2025, 7:18:09 AM12/12/25

to FUMA GWAS users

Hi Qiu,

When you put in the MHC region:
Screenshot 2025-12-12 131701.png

you put in chr6:25000000-35000000

You should put in 25000000-35000000 like the example.

Best,
Tanya

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