gene2func enrichment analysis input genes

[virginiad...@gmail.com]

Hi,

I have a list of around 11,000 genes to perform gene2func enrichment analysis.

When I use all genes as input I only obtain any significant enrichment in two cathegories (even if I change "Maximum adjusted P-value for gene set association" to 1), but when I split the list I obtain significant enrichment separately in all categories.

¿Is there a maximum number of input genes for the different sections of gene2func enrichment?

Thank you

Virginia

[Kyoko Watanabe]

Hi Virginia,

There is no maximum number of genes you can submit.

If you can share gene2func job ID, I will have a look if anything went wrong from the server side.

Best,

Kyoko

[virginiad...@gmail.com]

Hi Kyoko,

Thank you for the response.

This is the job id: 36148

Best,

Virginia

[Kyoko Watanabe]

Hi Virginia,

I am sorry for the slow response.

I gound a minor bug outputting special characters in some of gene set names which terminated the output of genesets.

I have fixed the problem now, could you submit again?

Best,

Kyoko

[virginiad...@gmail.com]

Hi Kyoko,

Thanks for your help. Now I've been able to retrieve the results for all sections of gene2func enrichment analyses.

Best,

Virginia