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Good morning, I have uploaded some jobs to FUMA and it has returned error 005 stating that it has not found any significant SNPs (threshold e-6), however there are significant SNPs in the job data and I don't know what is really happening. I'm leaving the IDs here in case you can take a look.
ID: 499815
Thank you very much.
Tanya Phung
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Jun 26, 2024, 5:20:16 PM6/26/24
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Hello,
This is the p value of the top 10 SNPs in your file: p 0.00118867 0.0192917 0.0244946 0.0889693 0.0961147 0.113895 0.147393 0.172754 0.182953 0.222144
As you can see, these p values are >10e-6.
Are there variants in your input files where the p values <10e-6? On the manhanttan plot, are there variants that pass the threshold?