ERROR:001
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Holly Poore
Jul 8, 2024, 4:00:45 PM7/8/24
to FUMA GWAS users
I received the error 001 for my job (ID: 503335). I have looked through the checklist for formatting the file, but I cannot determine what is wrong with my file. Any help would be appreciated. Thank you!
Holly
Anastasios Mitsigkolas
Jul 9, 2024, 2:54:25 AM7/9/24
to FUMA GWAS users
Hi there,
could you please provide the first 20 lines of your input file?
Kind regards,
Tasos
Kind regards,
Tasos
Holly Poore
Jul 9, 2024, 12:58:29 PM7/9/24
to FUMA GWAS users
Yes, see below. Since I posted this question, I made a change to the file and reran the job, but it failed with the same error. The most recent job ID is 503677. Thank you!
rs1000000 12 126890980 0.223658 G A 0.00540652428764314 0.00154451757545558 3.50046148620123 1.65919576885839e-194
rs10000000 4 40088896 0.0586481 A T 0.00482072863444255 0.00282364139493685 1.70727367968423 2.50937609736644e-194
rs10000003 4 57561647 0.297217 A G 0.00104681986549922 0.00140434655166276 0.745414202968472 1.74445107119119e-194
rs10000010 4 21618674 0.49006 T C 0.000574848774561029 0.00128676990340155 0.446737814617381 8.46333819079747e-194
rs10000011 4 138223055 0.0318091 C T -0.00446747684524555 0.00315093585590005 -1.41782538571209 3.57396087130283e-194
rs10000012 4 1357325 0.140159 C G -0.000822422389935617 0.00186986099164134 -0.43983076475311 1.21833398974149e-193
rs10000013 4 37225069 0.229622 C A 0.00213065169305163 0.00155174371016892 1.3730693278078 4.467567390449e-194
rs10000014 4 178447148 0.39165 C T 0.000671345484674503 0.00133802486698305 0.501743653081902 1.00476679372781e-193
rs10000015 4 84143987 0.055666 A G -0.000284894511112616 0.0028165579777302 -0.101149883426936 1.08018921401317e-194
rs10000017 4 84778125 0.247515 C T -0.0029010286443725 0.00154845696693673 -1.87349645893713 5.348639989506e-194
rs10000018 4 100458448 0.277336 A G -0.000282387915438142 0.00140531360147456 -0.200942988911399 1.45694283202885e-194
rs1000002 3 183635768 0.480119 C T -0.00236676280934684 0.00128673482868476 -1.83935551955645 8.43942860403834e-194
rs10000021 4 159441457 0.205765 G T -6.54392568235798e-05 0.00163788252309805 -0.0399535717004913 1.04901639009735e-193
rs10000023 4 95733906 0.385686 G T -0.000448453208037853 0.0013058816793908 -0.343410291388006 3.55099947838406e-194
rs1000003 3 98342907 0.173956 A G -0.00222544545848882 0.00179090491533763 -1.24263741722394 6.35207680685792e-194
rs10000030 4 103374154 0.135189 G A 0.00116388234355426 0.00187933253988496 0.619306226467779 3.26636744363588e-194
rs10000031 4 69548949 0.186879 A G 0.00194467401037688 0.00176422977139039 1.10227933000149 2.52994871177089e-194
rs10000032 4 22588961 0.0387674 C T -0.000402280869269769 0.00334604600286217 -0.120225743736238 2.83947233613433e-194
rs10000033 4 139599898 0.471173 T C 0.00229506746406527 0.00129207706615119 1.77626205447774 1.95608157034844e-194
rs10000034 4 8174883 0.115308 T G 0.000935538500559811 0.00216838735687099 0.431444362371584 9.81768232908149e-194
rs10000036 4 139219262 0.49006 C T -0.000485010181321514 0.00128642400494719 -0.377022023420206 1.04160836760183e-194
Tanya Phung
Jul 9, 2024, 2:16:26 PM7/9/24
to FUMA GWAS users
Hello,
It appears that you put in 1203321 in the column specifying the column for N. You should put this in the number of N instead, see the circle area here:
It appears that you put in 1203321 in the column specifying the column for N. You should put this in the number of N instead, see the circle area here:
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