implode(): Invalid arguments passed

[Mahantesh B]

Hi team, 

I'm unable to run FUMA. I get the following error when I tried to upload my file:

implode(): Invalid arguments passed

(1/1) ErrorException

implode(): Invalid arguments passed

in S2GController.php line 356
at HandleExceptions->handleError(2, 'implode(): Invalid arguments passed', '/var/www/fuma/app/Http/Controllers/S2GController.php', 356, array('request' => object(Request), 'date' => '2023-11-19 14:35:28', 'jobID' => 294326, 'filedir' => '/data/fuma/jobs/294326', 'email' => 'email', 'numSchedJobs' => 0, 'queueCap' => 10, 'type' => 'application/x-gzip', 'jobtitle' => 'None', 'submitJob' => object(SubmitJob), 'leadSNPs' => 'input.lead', 'GWAS' => 'input.gwas', 'regions' => 'input.regions', 'leadSNPsfileup' => 0, 'GWASfileup' => 1, 'regionsfileup' => 0, 'f' => '19NOV2023.txt.gz', 'GRCh38' => 0, 'addleadSNPs' => 1, 'chrcol' => 'CHR', 'poscol' => 'BP', 'rsIDcol' => 'SNP', 'pcol' => 'pval', 'eacol' => 'A1', 'neacol' => 'A2', 'orcol' => 'NA', 'becol' => 'beta', 'secol' => 'se', 'exMHC' => 0, 'MHCopt' => 'NA', 'extMHC' => 'NA', 'ensembl' => null))
at implode(':', null)in S2GController.php line 356
at S2GController->newJob(object(Request))
at call_user_func_array(array(object(S2GController), 'newJob'), array(object(Request)))in Controller.php line 54
at Controller->callAction('newJob', array(object(Request)))in ControllerDispatcher.php line 45
at ControllerDispatcher->dispatch(object(Route), object(S2GController), 'newJob')in Route.php line 219
at Route->runController()in Route.php line 176
at Route->run()in Router.php line 680
at Router->Illuminate\Routing\{closure}(object(Request))in Pipeline.php line 30
at Pipeline->Illuminate\Routing\{closure}(object(Request))in Authenticate.php line 28
at Authenticate->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in VerifyCsrfToken.php line 75
at VerifyCsrfToken->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in SubstituteBindings.php line 41
at SubstituteBindings->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in ShareErrorsFromSession.php line 49
at ShareErrorsFromSession->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in StartSession.php line 56
at StartSession->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in AddQueuedCookiesToResponse.php line 37
at AddQueuedCookiesToResponse->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in EncryptCookies.php line 66
at EncryptCookies->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in Pipeline.php line 104
at Pipeline->then(object(Closure))in Router.php line 682
at Router->runRouteWithinStack(object(Route), object(Request))in Router.php line 657
at Router->runRoute(object(Request), object(Route))in Router.php line 623
at Router->dispatchToRoute(object(Request))in Router.php line 612
at Router->dispatch(object(Request))in Kernel.php line 176
at Kernel->Illuminate\Foundation\Http\{closure}(object(Request))in Pipeline.php line 30
at Pipeline->Illuminate\Routing\{closure}(object(Request))in CheckForMaintenanceMode.php line 62
at CheckForMaintenanceMode->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in Pipeline.php line 104
at Pipeline->then(object(Closure))in Kernel.php line 151
at Kernel->sendRequestThroughRouter(object(Request))in Kernel.php line 116
at Kernel->handle(object(Request))in index.php line 53

[Marijn Schipper]

Hi!

Often these issues arise from your upload not coming through due to a firewall blocking the internet either at your our our end.
 Could you try uploading from a VPN?

Cheers,
Marijn

Op zondag 19 november 2023 om 14:38:37 UTC+1 schreef Mahantesh B:

[zainab rehman]

Hi

I have got the same error while uploading my file. I tried a VPN and I also turned off the firewall. Nothing works, do you know if there is any other solution??

Thanks

[fuma.ctglab]

Dear users, 

This issue should be fixed now. Please try again and let us know if you have further issues. 

Thank you,
FUMA Team