Invalid argument passed

[alan mejia]

Hi,

Thanks for this great tool.

I have been getting this error since yesterday (below). To test if my submitted file is fine, I also tried with a file that was successfully submitted a couple of days ago, and it gave me an error too. 

Any thoughts?

Thanks

(1/1) ErrorException

implode(): Invalid arguments passed

in S2GController.php line 352
at HandleExceptions->handleError(2, 'implode(): Invalid arguments passed', '/var/www/fuma/app/Http/Controllers/S2GController.php', 352, array('request' => object(Request), 'date' => '2023-08-23 14:16:24', 'jobID' => 275923, 'filedir' => '/data/fuma/jobs/275923', 'email' => 'mejia.m...@gmail.com', 'numSchedJobs' => 0, 'queueCap' => 10, 'type' => 'text/plain', 'jobtitle' => 'None', 'submitJob' => object(SubmitJob), 'leadSNPs' => 'input.lead', 'GWAS' => 'input.gwas', 'regions' => 'input.regions', 'leadSNPsfileup' => 0, 'regionsfileup' => 0, 'addleadSNPs' => 1, 'chrcol' => 'chr', 'poscol' => 'ps', 'rsIDcol' => 'rs', 'pcol' => 'p_wald', 'eacol' => 'NA', 'neacol' => 'NA', 'orcol' => 'NA', 'becol' => 'beta', 'secol' => 'se', 'exMHC' => 0, 'MHCopt' => 'NA', 'extMHC' => 'NA', 'ensembl' => null))
at implode(':', null)in S2GController.php line 352
at S2GController->newJob(object(Request))
at call_user_func_array(array(object(S2GController), 'newJob'), array(object(Request)))in Controller.php line 54
at Controller->callAction('newJob', array(object(Request)))in ControllerDispatcher.php line 45
at ControllerDispatcher->dispatch(object(Route), object(S2GController), 'newJob')in Route.php line 219
at Route->runController()in Route.php line 176
at Route->run()in Router.php line 680
at Router->Illuminate\Routing\{closure}(object(Request))in Pipeline.php line 30
at Pipeline->Illuminate\Routing\{closure}(object(Request))in Authenticate.php line 28
at Authenticate->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in VerifyCsrfToken.php line 75
at VerifyCsrfToken->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in SubstituteBindings.php line 41
at SubstituteBindings->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in ShareErrorsFromSession.php line 49
at ShareErrorsFromSession->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in StartSession.php line 56
at StartSession->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in AddQueuedCookiesToResponse.php line 37
at AddQueuedCookiesToResponse->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in EncryptCookies.php line 66
at EncryptCookies->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in Pipeline.php line 104
at Pipeline->then(object(Closure))in Router.php line 682
at Router->runRouteWithinStack(object(Route), object(Request))in Router.php line 657
at Router->runRoute(object(Request), object(Route))in Router.php line 623
at Router->dispatchToRoute(object(Request))in Router.php line 612
at Router->dispatch(object(Request))in Kernel.php line 176
at Kernel->Illuminate\Foundation\Http\{closure}(object(Request))in Pipeline.php line 30
at Pipeline->Illuminate\Routing\{closure}(object(Request))in CheckForMaintenanceMode.php line 62
at CheckForMaintenanceMode->handle(object(Request), object(Closure))in Pipeline.php line 163
at Pipeline->Illuminate\Pipeline\{closure}(object(Request))in Pipeline.php line 53
at Pipeline->Illuminate\Routing\{closure}(object(Request))in Pipeline.php line 104
at Pipeline->then(object(Closure))in Kernel.php line 151
at Kernel->sendRequestThroughRouter(object(Request))in Kernel.php line 116
at Kernel->handle(object(Request))in index.php line 53

[d.p.wi...@vu.nl]

Hello,

This is an error that users report sometimes but we have never been able to replicate it. It is likely due to specific browser issues and stems from the fact that the ensembl version choice is being recorded as null ('ensembl' => null).

Previous users have reported that cntrl+click on ensembl version choice have helped solve the problem. Or loading parameters from a previous job which worked and then modifying them.

Let me know if either of these solutions work for you.

Cheers,

Doug

[alan mejia]

It did work.

Thanks a lot

Alan