FUMA error:01 for job 743024

[caroli...@gmail.com]

Hi there,

I have been using FUMA for years and absolutely love this tool - thank you for supporting it.

I am running into issues now since FUMA has been upgraded to version 2.0 with input files for SNP2GENE, where even previously formatted files that worked successfully are not working now.

Please see job 743024.

I am actually just trying to map a single locus to genes and would prefer to do this in FUMA for paper revisions.

I have pasted below my input files where I am including just one SNP and specifying with a separate lead SNPs file that same SNP. I have gone through the documentation & still am not sure what is going wrong.

snpid chrom pos A1 A2 OR SE P

rs12497850 3 48748989 G T 1.07756 0.014 9.7e-8

Lead snp file:

rsid chrom pos

rs12497850 3 48748989

Thoughts? Is this due to too few SNP(s) in the input files?

Carolina

[Tanya Phung]

Hi Carolina, 

Thank you for reporting the issue. There was an issue with deprecation due to upgrading python version. I have now fixed it. I confirmed that the jobs with your inputs were successful: 

You can try again now,
Tanya