(Input file format was not correct / There was no SNPs remained after formatting the input summary statistics.)

[Amin Hashemloo]

Dear Sir/Madam

I tried twice to run my data in fuma but both time I got the same Error and my columns name and format are correct . can you help me with this. here is the my job ID : job ID: 237498, job title: sd_fat_var_v2

Best Regards

Amin

[Tanya Phung]

Hello, 

Thanks for your message. 

From our end, I can see that in your input file, chromosome and position columns are not detected. In this case, FUMA uses the reference panel to extract the chromosome and position. The error is probably due to no variants are left after this step. For more information you can see the FAQ here: https://fuma.ctglab.nl/faq. 

To offer more support I would need to see the input file. Perhaps you could share the input file? 

Best,
Tanya