Generally, FLTK will try and read (from the OS) what display zoom factor to use, and adjust it's own zoom accordingly, at least on high-res displays, to try and make things come out the same size as other apps on that display...
I take it that is not working?
What OS are you running on, and what display zoom is set? What size do other applications appear?
That all said, with a recent version of fluid (e.g. 1.4.1, say) you should be able to go in to the menu:
Edit -> Settings --> Layout and fix the font size there (I don't think that will "fix" fluid itself, but it should help for any apps you build... maybe!)