fatal error: program_options.hpp not found. Installation problem

[Carlos Sarabia]

Hi everyone,

I am trying to install flashpca from git source (https://github.com/gabraham/flashpca) after installing boost, spectra and eigen.

OS specs: Ubuntu 16.04.6 LTS (64 bits)

I am encountering this problem:

$ cd flashpca

$ make all
g++ -I/home/carlos/Desktop/programs/spectra-pack -I/usr/local/include/boost/include/boost -I/usr/local/include/eigen -march=native -fopenmp -std=c++0x -O3 -DNDEBUG -DVERSION=\"2.0\" -funroll-loops -ftree-vectorize -ffast-math -c flashpca.cpp -o flashpca.o
flashpca.cpp:16:37: fatal error: boost/program_options.hpp: No such file or directory
compilation terminated.
Makefile:52: recipe for target 'flashpca.o' failed
make: *** [flashpca.o] Error 1

My Makefile:

EIGEN_INC=/usr/local/include/eigen
BOOST_INC=/usr/local/include/boost/include/boost
BOOST_LIB=/usr/local/lib/boostlibs
SPECTRA_INC=/home/carlos/Desktop/programs/spectra-pack

My /usr/local/include/boost/include/boost folder does indeed have program_options.hpp:

$ ls /usr/local/include/boost/include/boost/program_options.hpp
/usr/local/include/boost/include/boost/program_options.hpp

Anybody knows what could be happening?

Thanks!

Carlos

[Gad Abraham]

Hi Carlos,

You boost paths look a bit different to mine, on both Linux Ubuntu
12.04 and MacOS 10.14 I have
/usr/local/include/boost/program_options.hpp, but you have the
include/boost repeated twice.

Could it be something went wrong with the boost installation?

Regards

Gad

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