Unable to read file: java.io.EOFException

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Katie Lennard

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Jul 17, 2017, 2:55:40 AM7/17/17
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Hi there,

I'm struggling to import nexus files into FigTree on Mac Yosemite, java version 1.8.0_131. I get the error: Unable to read file: java.io.EOFException. Any help would be great. I've tried nexus sample files so I don't think it's a problem with my actual nexus file (attached).

Thanks..
1248.1.1.NPIF.DQ056780.1.1.mafft_alignment.nexus

Andrew Rambaut

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Jul 17, 2017, 2:58:42 AM7/17/17
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Dear Katie,

There are no trees in the nexus file you attached so nothing for FigTree to load.

Best,
Andrew

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<1248.1.1.NPIF.DQ056780.1.1.mafft_alignment.nexus>

Katie Lennard

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Jul 19, 2017, 4:22:42 AM7/19/17
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Hi Andrew,

Thanks for your kind reply, I thought the tree was built in FigTree. Have since managed to convert alignment to tree first and import into FigTree.

Regards,

Katie.


On Monday, 17 July 2017 08:58:42 UTC+2, rambaut wrote:
Dear Katie,

There are no trees in the nexus file you attached so nothing for FigTree to load.

Best,
Andrew
On 17 Jul 2017, at 07:07, Katie Lennard <katiev...@gmail.com> wrote:

Hi there,

I'm struggling to import nexus files into FigTree on Mac Yosemite, java version 1.8.0_131. I get the error: Unable to read file: java.io.EOFException. Any help would be great. I've tried nexus sample files so I don't think it's a problem with my actual nexus file (attached).

Thanks..

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