FDS is a low Mach number code. This is the first item noted in the overview of FDS in the Technical Refernece Guide.
FDS Technical Reference Guide
Chapter 2
Overview of the FDS Model
This chapter presents the governing equations of FDS and an outline of the general solution procedure.
Details are included in subsequent chapters. The purpose of this chapter is to highlight aspects of the
solution methodology that make it practical for thermally-driven flow simulations, in particular fire. Some
of the major features of the model, in its default operation, are:
• Low Mach, large-eddy simulation (LES)
If you want to model the hydrogen jet, you need to, as best you can, preserve the jet momentum. At the leak you have 100 % pure hydrogen flowing at sonic speeds. There a number of approaches in the literature for predicting the entrainment of jets as a function of distance from the leak. At some distance enough air will be entrained to reduce the speed to being "low-speed" (Mach <~0.3); however, at that point you no longer have pure hydrogen you have a mixture of hydrogen and air. You will need to develop an approach for doing this.