Execution stops at elastix node, but works with fastr execute
Mattias Hansson
Execution stops at the reg_mask node, but with fastr execute it produces output.
I am running fastr develop.
Script: /home/mhansson/fastr-scripts/PROOF_scripts/MultiAtlasApp_PROOF_FemkeSegmTEST_LEFT_onlyatlas.py
Excerpt from output:
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF103_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF227_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF227_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[WARNING] drmaaexecution:0406 >> Encountered (probably harmless) DRMAA exception: code 24: no usage information was returned for the completed job
[INFO] drmaaexecution:0432 >> DRMAA collection thread ended!
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF173_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF103_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF345_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF345_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF311_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF311_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_target___PROOF004_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_target___PROOF004_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_target/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF197_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF197_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF244_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF244_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_target___PROOF002_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_target___PROOF002_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_target/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF403_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF403_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF103_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF103_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF403_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF403_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF128_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF244_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF244_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF390_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF390_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF197_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF197_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF345_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF345_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF227_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF227_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_target___PROOF005_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_target___PROOF005_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_target/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF390_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF390_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF227_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF227_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF390_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF390_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF269_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF269_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF345_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF345_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF128_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF128_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF197_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF197_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF390_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF390_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF244_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF244_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF244_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF244_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF197_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF197_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF380_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF380_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF311_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF311_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF244_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF244_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF380_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF380_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF357_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF357_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF390_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF390_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF103_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF103_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF269_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF269_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF311_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF311_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF197_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF357_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF357_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF128_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF128_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF128_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF128_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF345_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF345_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF269_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF269_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF403_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF403_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF269_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF269_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF403_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF403_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF345_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF345_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF357_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF357_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF311_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF311_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF173_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF173_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF357_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF357_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF311_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF311_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF380_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF380_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF311_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF311_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF269_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF269_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF380_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF380_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_target___PROOF001_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_target___PROOF001_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_target/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF380_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF380_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF403_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF403_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF227_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF227_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF403_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF403_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF227_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF227_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF197_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF197_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF390_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF390_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF173_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF173_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF173_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF173_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF173_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF173_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF173_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF173_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF103_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF103_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF128_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF004_MRI_L_T0__PROOF128_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF357_MRI_L_T0 not found in DRMAA lookup
[INFO] executionpluginmanager:0453 >> Callback processing thread ended!
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF357_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF345_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF002_MRI_L_T0__PROOF345_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF103_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF103_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF380_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF380_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF128_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF128_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_target___PROOF003_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_target___PROOF003_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_target/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___n4_atlas___PROOF269_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___n4_atlas___PROOF269_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/n4_atlas/outputs/image in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF357_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF005_MRI_L_T0__PROOF357_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF244_MRI_L_T0 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF003_MRI_L_T0__PROOF244_MRI_L_T0 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
[INFO] drmaaexecution:0205 >> Job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF227_MRI_L_T30 not found in DRMAA lookup
[INFO] network:1109 >> Finished job FemkeOnlyAtlas___reg_genmask___PROOF001_MRI_L_T0__PROOF227_MRI_L_T30 with status JobState.cancelled
[ERROR] node:1192 >> Could not find required data for fastr:///networks/FemkeOnlyAtlas/nodelist/reg_genmask/outputs/transform in {}!
Traceback (most recent call last):
File "MultiAtlasApp_PROOF_FemkeSegmTEST_LEFT_onlyatlas.py", line 387, in <module>
main()
File "MultiAtlasApp_PROOF_FemkeSegmTEST_LEFT_onlyatlas.py", line 377, in main
network.execute(sourcedata_part, sinkdata,cluster_queue="week")
File "/home/mhansson/virtual_env_fastr_develop/fastr/fastr/core/network.py", line 995, in execute
joblist = node.execute()
File "/home/mhansson/virtual_env_fastr_develop/fastr/fastr/core/node.py", line 1165, in execute
for sample_index, sample_id, job_data, job_depends, failed_annotations in self.input_group_combiner:
File "/home/mhansson/virtual_env_fastr_develop/fastr/fastr/core/node.py", line 469, in iter_input_groups
for sample_payloads in itertools.product(*[ig.iterinputvalues for ig in self.input_groups.values()]):
File "/home/mhansson/virtual_env_fastr_develop/fastr/fastr/core/node.py", line 300, in iterinputvalues
yield self[index]
File "/home/mhansson/virtual_env_fastr_develop/fastr/fastr/core/node.py", line 164, in __getitem__
target_index=index)
File "/home/mhansson/virtual_env_fastr_develop/fastr/fastr/core/node.py", line 260, in find_source_index
target_index=target_index)
File "/home/mhansson/virtual_env_fastr_develop/fastr/fastr/core/node.py", line 288, in solve_broadcast
raise exceptions.FastrSizeMismatchError('The estimated size after broadcast matching is incorrect! (estimated {}, actual {})'.format(estimated_source_size, source_size))
fastr.exceptions.FastrSizeMismatchError: The estimated size after broadcast matching is incorrect! (estimated (13,), actual