My data structure is based in 151 individuals (rows) x 51 variables (columns = 1 categorical variable made up by 3 categories or groups(OO, NUTS, LFD), and 50 continuous numerical variables). The background of the experiment is based in 3 interventions in which patients go through different treatments.
My main point is what approach should I take? I've read here a post in which was recommended to take PCA and the categorical variable should fill the role of the supplementary qualitative variable:
On the other hand, as I've seen in other examples, the 'gene' dataset contained in the missMDA package, the MFA approach could be used. So, how is the best approach to deal with my dataset?
If I should take this last approach, I have a problem executing this code, after the imputation process to solve NA issue
res.mfa2 <- MFA(cbind.data.frame(PCA[, 1], res.impute$completeObs), group = c(1, 50), type = c("n", "s"), name.group = c("Intervention", "gene_Expression"), num.group.sup = 1)
Error in apply(Lg[group.actif, ], 2, sum) :
dim(X) must have a positive length