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Jorn Bruggeman
3/16/23
Move to GitHub Discussions
Hi all, We are moving discussions about FABM use and development to a dedicated “Discussions” section
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Move to GitHub Discussions
Hi all, We are moving discussions about FABM use and development to a dedicated “Discussions” section
3/16/23
Karsten Bolding
2/2/23
Fwd: job opportunities at Mercator
FYI ---------- Forwarded message --------- Fra: Stefano Ciavatta <scia...@mercator-ocean.fr>
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Fwd: job opportunities at Mercator
FYI ---------- Forwarded message --------- Fra: Stefano Ciavatta <scia...@mercator-ocean.fr>
2/2/23
vc.yum...@gmail.com
,
Jorn Bruggeman
2
12/15/22
gotm-fabm installation error for gsw
Hi Çağlar, That's a GOTM issue rather than a FABM issue – specifically, the GSW version included
unread,
gotm-fabm installation error for gsw
Hi Çağlar, That's a GOTM issue rather than a FABM issue – specifically, the GSW version included
12/15/22
Jorn Bruggeman
10/7/22
FABM presentation
Hi all, There is now a new “Presentations” section on the wiki where we will archive presentations
unread,
FABM presentation
Hi all, There is now a new “Presentations” section on the wiki where we will archive presentations
10/7/22
Harshal Chauhan
, …
harshal chauhan
3
10/6/22
GOTM initialization
Dear Jorn, Thank you for your reply. I have sent y request and email to the gotm user google group.
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GOTM initialization
Dear Jorn, Thank you for your reply. I have sent y request and email to the gotm user google group.
10/6/22
Karsten Lettmann
,
Jorn Bruggeman
6
7/13/22
Question about external surface fluxes when using built-in models
Hi Karsten, Yes, that makes perfect sense, thanks for explaining. And nice to hear about the model
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Question about external surface fluxes when using built-in models
Hi Karsten, Yes, that makes perfect sense, thanks for explaining. And nice to hear about the model
7/13/22
David Amptmeijer
,
Jorn Bruggeman
5
6/16/22
Reading atmospheric deposition into FABM
Hey Jorn, Thank you very much for your suggestion. Both the air sea exchange and wet deposition work
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Reading atmospheric deposition into FABM
Hey Jorn, Thank you very much for your suggestion. Both the air sea exchange and wet deposition work
6/16/22
Karsten Bolding
2
5/16/22
GOTM/FABM/ParSAC workshop
Hello A bit more than a month has passed since I sent out the mail to gauge the interest for a
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GOTM/FABM/ParSAC workshop
Hello A bit more than a month has passed since I sent out the mail to gauge the interest for a
5/16/22
Jorrit Mesman
4/11/22
Creating a common scaling factor for all instances
Dear all, In a FABM model I'm working on, I am trying to create a single scaling factor for all
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Creating a common scaling factor for all instances
Dear all, In a FABM model I'm working on, I am trying to create a single scaling factor for all
4/11/22
Karsten Bolding
4/6/22
A mail sent earlier today ended up in spam.
Hello I've been informed that a mail I sent earlier today concerning a workshop has ended up in
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A mail sent earlier today ended up in spam.
Hello I've been informed that a mail I sent earlier today concerning a workshop has ended up in
4/6/22
Jorn Bruggeman
,
Jorrit Mesman
2
3/1/22
Overview of biogeochemical models in FABM
Hello Jorn, Could you please add a Selmaprotbas entry (see below)? And thanks for the effort;
unread,
Overview of biogeochemical models in FABM
Hello Jorn, Could you please add a Selmaprotbas entry (see below)? And thanks for the effort;
3/1/22
Shajar Regev
,
Jorn Bruggeman
4
1/24/22
Error reading initial conditions
Hi Jorn and all, I tried to enter the initial condition file as if the variable is depth independent
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Error reading initial conditions
Hi Jorn and all, I tried to enter the initial condition file as if the variable is depth independent
1/24/22
Ulf Graewe
,
Jorn Bruggeman
2
12/16/21
Modulation of external bottom fluxes
Hi Ulf, My approach would be to compute the final bottom flux in the “do_bottom” routine of a FABM
unread,
Modulation of external bottom fluxes
Hi Ulf, My approach would be to compute the final bottom flux in the “do_bottom” routine of a FABM
12/16/21
Mattias Cape
,
Jorn Bruggeman
3
11/30/21
retrieving time step GOTM-FABM
Thank you, Jorn, makes perfect sense. I appreciate all the context, makes for a good learning
unread,
retrieving time step GOTM-FABM
Thank you, Jorn, makes perfect sense. I appreciate all the context, makes for a good learning
11/30/21
Mattias Cape
,
Jorn Bruggeman
5
11/24/21
vertical integral in biogeochemical model
Thank you Jorn, this gives me plenty to go on! Best, Mattias On Wed, Nov 24, 2021 at 8:41 AM Jorn
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vertical integral in biogeochemical model
Thank you Jorn, this gives me plenty to go on! Best, Mattias On Wed, Nov 24, 2021 at 8:41 AM Jorn
11/24/21
Karsten Bolding
10/23/21
Fwd: Post Doc Position: Modeling cyanobacteria blooms and toxin production under climate change
FYI ---------- Forwarded message --------- Fra: Ferdi Hellweger <fhell...@gmail.com> Date:
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Fwd: Post Doc Position: Modeling cyanobacteria blooms and toxin production under climate change
FYI ---------- Forwarded message --------- Fra: Ferdi Hellweger <fhell...@gmail.com> Date:
10/23/21
Carsten Lemmen
,
Jorn Bruggeman
2
9/30/21
Can the host know what routines are implemented by a model?
Hi Carsten, Sorry for the late reply. As it stands, not even FABM itself knows what routines are
unread,
Can the host know what routines are implemented by a model?
Hi Carsten, Sorry for the late reply. As it stands, not even FABM itself knows what routines are
9/30/21
Johannes Feldbauer
, …
Jorn Bruggeman
4
9/9/21
sedimentation
Yes, it's worth noting that FABM's support for “bottom throughout the water column” (cells
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sedimentation
Yes, it's worth noting that FABM's support for “bottom throughout the water column” (cells
9/9/21
Svetla Marinova
,
Jorn Bruggeman
5
7/23/21
precipitation as a standard variable
Dear Jorn, Thank you for the help. I will try to add precipitation in getm_fabm.F90. Actually, there
unread,
precipitation as a standard variable
Dear Jorn, Thank you for the help. I will try to add precipitation in getm_fabm.F90. Actually, there
7/23/21
Ceren Guraslan
,
miladinov...@gmail.com
3
7/13/21
implementation of bsem.f90 code
Dear Svetla, Thank you for your kindness in sending your modified version of FABM Black Sea code.
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implementation of bsem.f90 code
Dear Svetla, Thank you for your kindness in sending your modified version of FABM Black Sea code.
7/13/21
Karsten Bolding
,
Fenjuan Hu
4
6/25/21
To potential model developers ....
Just to be sure at the times - as Jorn and I got confused between us it is 15 British Summer Time and
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To potential model developers ....
Just to be sure at the times - as Jorn and I got confused between us it is 15 British Summer Time and
6/25/21
Hans Burchard
6/23/21
Job advertisements at GEOMAR (short deadline)
Dear all, here are two interesting research positions advertised by Andreas Oschlies in Kiel (Germany
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Job advertisements at GEOMAR (short deadline)
Dear all, here are two interesting research positions advertised by Andreas Oschlies in Kiel (Germany
6/23/21
Carsten Lemmen
,
Jorn Bruggeman
2
6/15/21
get_light() -> prepare_inputs() transition
Hi Carsten, Prepare_inputs should call any “do_column” (or the old name: “get_light”) routine that
unread,
get_light() -> prepare_inputs() transition
Hi Carsten, Prepare_inputs should call any “do_column” (or the old name: “get_light”) routine that
6/15/21
Carsten Lemmen
,
Jorn Bruggeman
2
6/8/21
Time integration for non-diffusive terms
Hi Enpei (Carsten), Without further specifics (What host model? What type of terms, and for what
unread,
Time integration for non-diffusive terms
Hi Enpei (Carsten), Without further specifics (What host model? What type of terms, and for what
6/8/21
Carsten Lemmen
,
Jorn Bruggeman
3
5/21/21
Looping over interior diags
Dear Jorn, thanks for the elaborate explanation, it helped to resolve the problem in the SCHISM host.
unread,
Looping over interior diags
Dear Jorn, thanks for the elaborate explanation, it helped to resolve the problem in the SCHISM host.
5/21/21
Jorrit Mesman
,
Jorn Bruggeman
3
5/10/21
Question about weighting in Parsac
Thank you so much Jorn, that clarifies a lot. I already experimented a bit with subsampling
unread,
Question about weighting in Parsac
Thank you so much Jorn, that clarifies a lot. I already experimented a bit with subsampling
5/10/21
Inga Hense
3/31/21
PhD position in marine ecosystem modelling
Dear all, there is an open PhD position in marine ecosystem modelling for 3 years at Hamburg
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PhD position in marine ecosystem modelling
Dear all, there is an open PhD position in marine ecosystem modelling for 3 years at Hamburg
3/31/21
刘奇
3/22/21
abnormal high values in FVCOM-FABM-ERSEM
Dear FABM-users I am working on running FVCOM-FABM-ERSEM with offline configuration. I ran the
unread,
abnormal high values in FVCOM-FABM-ERSEM
Dear FABM-users I am working on running FVCOM-FABM-ERSEM with offline configuration. I ran the
3/22/21
David Amptmeijer
,
Jorn Bruggeman
2
3/16/21
Set state variable to fixed value
Hi David, Typically when equilibration is (near) instantaneous, I would try to represent the
unread,
Set state variable to fixed value
Hi David, Typically when equilibration is (near) instantaneous, I would try to represent the
3/16/21
Inga Hense
1/19/21
University of Hamburg-PHD-position announcement
Dear all, there is an open PhD-position in aquatic/marine ecosystem modelling at Hamburg University.
unread,
University of Hamburg-PHD-position announcement
Dear all, there is an open PhD-position in aquatic/marine ecosystem modelling at Hamburg University.
1/19/21