Overview of biogeochemical models in FABM

[Jorn Bruggeman]

Hi all,

 

I’ve started a wiki page listing the biogeochemical models available in FABM:

 

https://github.com/fabm-model/fabm/wiki/Biogeochemical-models-in-FABM

 

This is foremost meant to show the codebases of models that are externally maintained, so that potential users have a way to discover those – see the table at the bottom of the page. At the moment, this list is far from complete. If you would like to see you own model(s) listed, please send me the information needed: the model name, a (very) short description, a link to the repository or an e-mail address that users can contact, and optionally a reference. And if you would like to extend or correct an existing entry, let me know as well.

 

Cheers,

 

Jorn

[Patrick Farnole]

Hello Jorn - I thought I would post this message here for the community to be notified.

In response to your message, please find below the details to access the CSIB-1D (Canadian Sea Ice Biogeochemistry):

• model name: CSIB-1D (Canadian Sea Ice Biogeochemistry)
• (very) short description: a coupled ocean sea-ice model for Ice Algae, Carbon and DMS cycles. Requires GOTM UVic Ice model (https://github.com/PatrickFarnole/code).
• link to the repository: https://github.com/PatrickFarnole/fabm
• e-mail address: nadja....@dfo-mpo.gc.ca, pfar...@uvic.ca
• references:
  • Mortenson, E, et al 2017 A model-based analysis of physical and biological controls on ice algal and pelagic primary production in Resolute Passage. Elem Sci Anth, 5: 39, DOI: https://doi.org/10.1525/elementa.229.
    
  • Mortenson, E., Steiner, N., Monahan, A. H., Miller, L. A., Geilfus, N.-X., & Brown, K. (2018). A model-based analysis of physical and biogeochemical controls on carbon exchange in the upper water column, sea ice, and atmosphere in a seasonally ice-covered Arctic strait. Journal of Geophysical Research: Oceans, 123, 7529–7549. https://doi.org/10.1029/2018JC014376.
    
  • Hayashida, H., Steiner, N., Monahan, A., Galindo, V., Lizotte, M., and Levasseur, M.: Implications of sea-ice biogeochemistry for oceanic production and emissions of dimethyl sulfide in the Arctic, Biogeosciences, 14, 3129–3155, https://doi.org/10.5194/bg-14-3129-2017, 2017.

Please let me know if you need anything else to add our model to your list.

Best,

Patrick