EXPANDS 2.0.0 release

[Noemi Andor]

EXPANDS 2.0.0 is now available on CRAN:

 

https://cran.r-project.org/web/packages/expands

 

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CHANGES IN EXPANDS VERSION 2.0.0

NEW FEATURES
o Copy-neutral LOH are now modeled.

BUG FIXES
o Fixed bug in plotSPs(..): adjusted y-axis to include 0 (i.e. deletion scenario).

OTHER CHANGES
o More robust calculation of cell frequency probabilities from kernel density estimates instead of Gaussian mixtures.
o Complete remodeling of java core to better transparency of the four different evolutionary scenarios.