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Pablo Aguado
,
Alexandros Stamatakis
3
Mar 16
Partitions question ExaBayes 1.4.1
Thank you very much for your reply Alexis, understood. Warm regards, P.Aguado-Ramsay El jue, 16 mar
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Partitions question ExaBayes 1.4.1
Thank you very much for your reply Alexis, understood. Warm regards, P.Aguado-Ramsay El jue, 16 mar
Mar 16
Alexandros Stamatakis
Mar 2
Two PhD Positions in my new research group in Crete
Dear Users of our Software, Please accept my apologies that I am slightly misusing our software
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Two PhD Positions in my new research group in Crete
Dear Users of our Software, Please accept my apologies that I am slightly misusing our software
Mar 2
Tobias Senoner
,
Alexandros Stamatakis
2
Mar 1
Optimize ExaBayes run
Hi Tobias, > I am currently running ExaBays for about 1.5K sequences. It is running > now for
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Optimize ExaBayes run
Hi Tobias, > I am currently running ExaBays for about 1.5K sequences. It is running > now for
Mar 1
Angélica Gallego Narbón
,
Alexandros Stamatakis
5
Feb 18
ExaBayes error parsing
I´ll give it a try, thank you! El sábado, 18 de febrero de 2023 a las 20:16:17 UTC+1, alexandros...@
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ExaBayes error parsing
I´ll give it a try, thank you! El sábado, 18 de febrero de 2023 a las 20:16:17 UTC+1, alexandros...@
Feb 18
Alexandros Stamatakis
Jan 20
Two PostDoc Positions in my new research group in Crete
Dear Users of our Software, Please accept my apologies that I am slightly misusing our software
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Two PostDoc Positions in my new research group in Crete
Dear Users of our Software, Please accept my apologies that I am slightly misusing our software
Jan 20
Ivan Koludarov
,
Alexandros Stamatakis
2
11/7/22
Phyllip body incorrect error - what are the exact format requirements that exabayes needs?
Dear Ivan, Can you send me an example MSA file causing this error. As far as I remember ExaBayes
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Phyllip body incorrect error - what are the exact format requirements that exabayes needs?
Dear Ivan, Can you send me an example MSA file causing this error. As far as I remember ExaBayes
11/7/22
Alexandros Stamatakis
10/25/22
Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st
Dear users of our Tools, Last call for applications to our 2023 version of the summer school on
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Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st
Dear users of our Tools, Last call for applications to our 2023 version of the summer school on
10/25/22
Alexandros Stamatakis
10/7/22
Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st
Dear users of our Tools, Last call for applications to our 2023 version of the summer school on
unread,
Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st
Dear users of our Tools, Last call for applications to our 2023 version of the summer school on
10/7/22
Alexandros Stamatakis
2
9/12/22
Applications for 2023 school on Computational Molecular Evolution are open
Here is a reminder, applications for our summer school will close on November 1st 2022. Alexis On
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Applications for 2023 school on Computational Molecular Evolution are open
Here is a reminder, applications for our summer school will close on November 1st 2022. Alexis On
9/12/22
Alexandros Stamatakis
5/31/22
Primary and Secondary school outreach Material - The Aegean Archipelago: a living laboratory of evolutionary biology
Dear Users of our Bioinformatics tools, Recently, we have put together 3 games for primary school
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Primary and Secondary school outreach Material - The Aegean Archipelago: a living laboratory of evolutionary biology
Dear Users of our Bioinformatics tools, Recently, we have put together 3 games for primary school
5/31/22
zjche...@gmail.com
,
Alexandros Stamatakis
2
4/6/22
compile error for exabayes-1.5.1 MPI version
This looks like some MPI installation issue, not something related to Exabayes itself. Do you have a
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compile error for exabayes-1.5.1 MPI version
This looks like some MPI installation issue, not something related to Exabayes itself. Do you have a
4/6/22
Guoyi Zhang
12/11/21
Compile error for version 1.5.1
My command is cd $srcdir/$pkgname-$pkgver ./configure --prefix=/usr make For details make --version
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Compile error for version 1.5.1
My command is cd $srcdir/$pkgname-$pkgver ./configure --prefix=/usr make For details make --version
12/11/21
zjche...@gmail.com
,
Alexandros Stamatakis
4
10/19/21
PartitionFinder model selection for exabayes
Dear Jiachen, > Thanks very much for your reply, it helps a lot. > > Since you said that
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PartitionFinder model selection for exabayes
Dear Jiachen, > Thanks very much for your reply, it helps a lot. > > Since you said that
10/19/21
Mael Glon
, …
Alexandros Stamatakis
8
10/7/20
credibleSet only producing one tree
Great, thank you both for your help! On Wednesday, October 7, 2020 at 1:39:19 AM UTC-4 alexandros...@
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credibleSet only producing one tree
Great, thank you both for your help! On Wednesday, October 7, 2020 at 1:39:19 AM UTC-4 alexandros...@
10/7/20
Dylan Cohen
,
Alexandros Stamatakis
2
10/6/20
Exabayes Time calibrated trees
Hi Dylan, > I am wondering if there is a way to get time calibrated phylogeny with > confidence
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Exabayes Time calibrated trees
Hi Dylan, > I am wondering if there is a way to get time calibrated phylogeny with > confidence
10/6/20
Dylan Cohen
, …
Dylan Cohen
3
9/27/20
How do you fix a topology as a prior?
Hi Andre, Thanks for the comment, it is working now. Best, Dylan On Sun, Sep 27, 2020 at 12:07 AM
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How do you fix a topology as a prior?
Hi Andre, Thanks for the comment, it is working now. Best, Dylan On Sun, Sep 27, 2020 at 12:07 AM
9/27/20
jiachen zhu
, …
Mark Miller
3
7/14/20
error in cipres
Jiachen, Was this an attempt to restart a completed (timed out) run, or a new run? Mark On Tuesday,
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error in cipres
Jiachen, Was this an attempt to restart a completed (timed out) run, or a new run? Mark On Tuesday,
7/14/20
Debajyoti Kabiraj
, …
Alexandros Stamatakis
8
7/8/20
Error: parsing file part.txt failed; character has changed from '\3' to '/3'
Dear Debajyoti, Please have a look at the detailed manual: https://cme.h-its.org/exelixis/web/
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Error: parsing file part.txt failed; character has changed from '\3' to '/3'
Dear Debajyoti, Please have a look at the detailed manual: https://cme.h-its.org/exelixis/web/
7/8/20
Guarino Colli
,
Andre Aberer
3
6/8/20
Compilation error (ExaBayes 1.5) on Ubuntu 20.04
Thanks a lot, Andre! This allowed me to compile Exabayes. On Sunday, June 7, 2020 at 4:30:19 PM UTC-3
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Compilation error (ExaBayes 1.5) on Ubuntu 20.04
Thanks a lot, Andre! This allowed me to compile Exabayes. On Sunday, June 7, 2020 at 4:30:19 PM UTC-3
6/8/20
Debajyoti Kabiraj
, …
Alexandros Stamatakis
3
6/5/20
Exabayes Error in Cipres: Exited with exit code 134
Please see the reply by Andre on this issue. Alexis On 06.06.20 05:03, Jing Li Xuan wrote: > Hello
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Exabayes Error in Cipres: Exited with exit code 134
Please see the reply by Andre on this issue. Alexis On 06.06.20 05:03, Jing Li Xuan wrote: > Hello
6/5/20
Ivan Koludarov
, …
Alexey Kozlov
6
5/12/20
Error with compiling
Hi Alexey, It worked, so many thanks! Best, Ivan On Saturday, 9 May 2020 14:09:31 UTC+2, Alexey
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Error with compiling
Hi Alexey, It worked, so many thanks! Best, Ivan On Saturday, 9 May 2020 14:09:31 UTC+2, Alexey
5/12/20
David Lohman
,
Alexandros Stamatakis
4
5/4/20
brlens error
great :-) Alexis On 05.05.20 04:13, David Lohman wrote: > Dear Alexandros, > > I downloaded
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brlens error
great :-) Alexis On 05.05.20 04:13, David Lohman wrote: > Dear Alexandros, > > I downloaded
5/4/20
David Lohman
,
Alexandros Stamatakis
3
5/3/20
Model specification for each partition
Dear Alexis, Thanks! Best, David Lohman On Sunday, May 3, 2020 at 5:27:46 AM UTC-4, Alexandros
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Model specification for each partition
Dear Alexis, Thanks! Best, David Lohman On Sunday, May 3, 2020 at 5:27:46 AM UTC-4, Alexandros
5/3/20
Tobias vE
, …
Dai Nguyen
11
4/14/20
Several Errors when running ExaBayes
Dear Prof. Alexis, I already have a MPICH2. I tried install Exbayes following the Exabayes manual but
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Several Errors when running ExaBayes
Dear Prof. Alexis, I already have a MPICH2. I tried install Exbayes following the Exabayes manual but
4/14/20
Alexandros Stamatakis
10/31/19
Application deadline (NOV 18) Summer School on Computational Molecular Evolution Crete 2020 approaching
Dear Users of our Software, Applications for our 12th summer school on computational molecular
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Application deadline (NOV 18) Summer School on Computational Molecular Evolution Crete 2020 approaching
Dear Users of our Software, Applications for our 12th summer school on computational molecular
10/31/19
Alexandros Stamatakis
10/22/19
Summer School Computational Molecular Evolution Crete May 10 - May 21 2020
Dear Users of our Software, Applications for our 12th summer school on computational molecular
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Summer School Computational Molecular Evolution Crete May 10 - May 21 2020
Dear Users of our Software, Applications for our 12th summer school on computational molecular
10/22/19
Matthew Prebus
,
Alexandros Stamatakis
2
10/16/19
convergence issues
Hi Matthew, Sorry for the late reply, I was on parental leave. It may well be that your dataset does
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convergence issues
Hi Matthew, Sorry for the late reply, I was on parental leave. It may well be that your dataset does
10/16/19
Xavi Grau
, …
Andre Aberer
6
7/31/19
GTR+Gamma model for amino acid data
Alexis is right on both accounts. -Andre Alexandros Stamatakis writes: > I am not sure actually, I
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GTR+Gamma model for amino acid data
Alexis is right on both accounts. -Andre Alexandros Stamatakis writes: > I am not sure actually, I
7/31/19
Maripaz Montero
,
Andre Aberer
2
7/31/19
Levels of Parallelism
Hi Maripaz, the given dataset is too small (particularly in terms of base pairs) to use a lot of
unread,
Levels of Parallelism
Hi Maripaz, the given dataset is too small (particularly in terms of base pairs) to use a lot of
7/31/19
melisa eliana magallanes
, …
Miller, Mark
11
7/16/19
consense trees on CIPRES
The service has been restored, please let me know if you have any issues using consense in the
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consense trees on CIPRES
The service has been restored, please let me know if you have any issues using consense in the
7/16/19