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Alexandros Stamatakis

Mar 26

Workshop on Biodiversity Genomics in Crete - May 2025

Dear Users of our software tools, Are you looking for a good excuse to visit Crete? Join us for the

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Workshop on Biodiversity Genomics in Crete - May 2025

Dear Users of our software tools, Are you looking for a good excuse to visit Crete? Join us for the

Mar 26

Alexandros Stamatakis

Mar 19

raxtax: a novel tool for taxonomic classification

Dear Users Check out raxtax, our new open-source tool for taxonomic classification of barcoding

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raxtax: a novel tool for taxonomic classification

Dear Users Check out raxtax, our new open-source tool for taxonomic classification of barcoding

Mar 19

Alexandros Stamatakis

Feb 24

LEGEND conference on Machine Learning for Evolutionary Genomics Data - French Alps - Dec 8-12 2025

Dear Users of our tools, The second edition of our LEGEND conference on Machine Learning for

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LEGEND conference on Machine Learning for Evolutionary Genomics Data - French Alps - Dec 8-12 2025

Dear Users of our tools, The second edition of our LEGEND conference on Machine Learning for

Feb 24

Alexandros Stamatakis

10/21/24

Applications for 2025 computational molecular evolution summer school close in 10 days

Dear Users of our software tools, Applications are still open for the 2025 school on computational

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Applications for 2025 computational molecular evolution summer school close in 10 days

Dear Users of our software tools, Applications are still open for the 2025 school on computational

10/21/24

Alexandros Stamatakis

10/8/24

Applications for 2025 computational molecular evolution summer school close in 3 weeks

Dear Users of our software tools, Applications are still open for the 2025 school on computational

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Applications for 2025 computational molecular evolution summer school close in 3 weeks

Dear Users of our software tools, Applications are still open for the 2025 school on computational

10/8/24

Alexandros Stamatakis

9/17/24

Registrations for 2025 computational molecular evolution summer school are open

Dear Users of our software tools, Registrations are open for the 2025 school on computational

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Registrations for 2025 computational molecular evolution summer school are open

Dear Users of our software tools, Registrations are open for the 2025 school on computational

9/17/24

Alexandros Stamatakis

8/7/24

Registrations for 2025 computational molecular evolution summer school are open

Dear Users of our software tools, Registrations are open for the 2025 school on computational

unread,

Registrations for 2025 computational molecular evolution summer school are open

Dear Users of our software tools, Registrations are open for the 2025 school on computational

8/7/24

Ziv Lieberman, Alexandros Stamatakis3

8/6/24

Generating consensus trees directly prior to run completion

Hi Alexander, Of course, thank you! I had just read this incorrectly. Thank you for pointing me back

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Generating consensus trees directly prior to run completion

Hi Alexander, Of course, thank you! I had just read this incorrectly. Thank you for pointing me back

8/6/24

Guoyi Zhang, … Alexandros Stamatakis3

7/22/24

Compile error for version 1.5.1

Thank you so much Tobias, much appreciated. Alexis On 20.07.24 00:09, Tobias Senoner wrote: > Hi,

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Compile error for version 1.5.1

Thank you so much Tobias, much appreciated. Alexis On 20.07.24 00:09, Tobias Senoner wrote: > Hi,

7/22/24

María Valerio, Alexandros Stamatakis3

3/6/24

I am in fact running it on a cluster. I have already contacted the responsible staff but their

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I am in fact running it on a cluster. I have already contacted the responsible staff but their

3/6/24

Alexandros Stamatakis

1/16/24

Crete May 2024 - Machine Learning for Evolutionary Genomics Data

Dear Users of our Software, Sorry for bothering you with some event advertisement again via this list

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Crete May 2024 - Machine Learning for Evolutionary Genomics Data

Dear Users of our Software, Sorry for bothering you with some event advertisement again via this list

1/16/24

Shoyo Sato, Alexandros Stamatakis4

1/11/24

exabayes consense issue

Dear Shoyo, I am afraid not, but I am ccing Alexey who has developed RAxML-NG. Alexey, given the

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exabayes consense issue

Dear Shoyo, I am afraid not, but I am ccing Alexey who has developed RAxML-NG. Alexey, given the

1/11/24

12/1/23

recent spam events

Dear exabayes users, we are sorry to see that this google group has been abused as a platform for

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recent spam events

Dear exabayes users, we are sorry to see that this google group has been abused as a platform for

12/1/23

Alexandros Stamatakis

11/15/23

Two weeks remaining to apply for 2024 Summer School on Computational Molecular Evolution

Dear Users of our software tools, The deadline for applications to our 14th summer school on

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Two weeks remaining to apply for 2024 Summer School on Computational Molecular Evolution

Dear Users of our software tools, The deadline for applications to our 14th summer school on

11/15/23

Alexandros Stamatakis

10/26/23

Applications for 2024 Summer School on Computational Molecular Evolution are open

Dear Users of our software tools, The applications for our 14th summer school on COmputational

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Applications for 2024 Summer School on Computational Molecular Evolution are open

Dear Users of our software tools, The applications for our 14th summer school on COmputational

10/26/23

gang liu, … Alexandros Stamatakis9

9/4/23

parsing file aln.part

Thanks a lot Mark, I will try to get in touch with Andre such that he fixes it. Alexis On 01.09.23 22

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parsing file aln.part

Thanks a lot Mark, I will try to get in touch with Andre such that he fixes it. Alexis On 01.09.23 22

9/4/23

Alexandros Stamatakis

7/11/23

One PostDoc Positions in my new research group in Crete

Dear Users of our Software, Please accept my apologies that I am slightly misusing our software

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One PostDoc Positions in my new research group in Crete

Dear Users of our Software, Please accept my apologies that I am slightly misusing our software

7/11/23

David Lohman, Alexandros Stamatakis2

4/10/23

Odd LnPr traces

Hi David, Could you also send me what the LnL trace looks like? It could be that the MCMC is sampling

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Odd LnPr traces

Hi David, Could you also send me what the LnL trace looks like? It could be that the MCMC is sampling

4/10/23

Pablo Aguado, Alexandros Stamatakis3

3/16/23

Partitions question ExaBayes 1.4.1

Thank you very much for your reply Alexis, understood. Warm regards, P.Aguado-Ramsay El jue, 16 mar

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Partitions question ExaBayes 1.4.1

Thank you very much for your reply Alexis, understood. Warm regards, P.Aguado-Ramsay El jue, 16 mar

3/16/23

Alexandros Stamatakis

3/2/23

Two PhD Positions in my new research group in Crete

Dear Users of our Software, Please accept my apologies that I am slightly misusing our software

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Two PhD Positions in my new research group in Crete

Dear Users of our Software, Please accept my apologies that I am slightly misusing our software

3/2/23

Tobias Senoner, Alexandros Stamatakis2

3/1/23

Optimize ExaBayes run

Hi Tobias, > I am currently running ExaBays for about 1.5K sequences. It is running > now for

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Optimize ExaBayes run

Hi Tobias, > I am currently running ExaBays for about 1.5K sequences. It is running > now for

3/1/23

Angélica Gallego Narbón, Alexandros Stamatakis5

2/18/23

ExaBayes error parsing

I´ll give it a try, thank you! El sábado, 18 de febrero de 2023 a las 20:16:17 UTC+1, alexandros...@

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ExaBayes error parsing

I´ll give it a try, thank you! El sábado, 18 de febrero de 2023 a las 20:16:17 UTC+1, alexandros...@

2/18/23

Alexandros Stamatakis

1/20/23

Two PostDoc Positions in my new research group in Crete

Dear Users of our Software, Please accept my apologies that I am slightly misusing our software

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Two PostDoc Positions in my new research group in Crete

Dear Users of our Software, Please accept my apologies that I am slightly misusing our software

1/20/23

Ivan Koludarov, Alexandros Stamatakis2

11/7/22

Phyllip body incorrect error - what are the exact format requirements that exabayes needs?

Dear Ivan, Can you send me an example MSA file causing this error. As far as I remember ExaBayes

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Phyllip body incorrect error - what are the exact format requirements that exabayes needs?

Dear Ivan, Can you send me an example MSA file causing this error. As far as I remember ExaBayes

11/7/22

Alexandros Stamatakis

10/25/22

Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st

Dear users of our Tools, Last call for applications to our 2023 version of the summer school on

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Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st

Dear users of our Tools, Last call for applications to our 2023 version of the summer school on

10/25/22

Alexandros Stamatakis

10/7/22

Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st

Dear users of our Tools, Last call for applications to our 2023 version of the summer school on

unread,

Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st

Dear users of our Tools, Last call for applications to our 2023 version of the summer school on

10/7/22

Alexandros Stamatakis2

9/12/22

Applications for 2023 school on Computational Molecular Evolution are open

Here is a reminder, applications for our summer school will close on November 1st 2022. Alexis On

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Applications for 2023 school on Computational Molecular Evolution are open

Here is a reminder, applications for our summer school will close on November 1st 2022. Alexis On

9/12/22

Alexandros Stamatakis

5/31/22

Primary and Secondary school outreach Material - The Aegean Archipelago: a living laboratory of evolutionary biology

Dear Users of our Bioinformatics tools, Recently, we have put together 3 games for primary school

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Primary and Secondary school outreach Material - The Aegean Archipelago: a living laboratory of evolutionary biology

Dear Users of our Bioinformatics tools, Recently, we have put together 3 games for primary school

5/31/22

zjche...@gmail.com, Alexandros Stamatakis2

4/6/22

compile error for exabayes-1.5.1 MPI version

This looks like some MPI installation issue, not something related to Exabayes itself. Do you have a

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compile error for exabayes-1.5.1 MPI version

This looks like some MPI installation issue, not something related to Exabayes itself. Do you have a

4/6/22

zjche...@gmail.com, Alexandros Stamatakis4

10/19/21

PartitionFinder model selection for exabayes

Dear Jiachen, > Thanks very much for your reply, it helps a lot. > > Since you said that

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PartitionFinder model selection for exabayes

Dear Jiachen, > Thanks very much for your reply, it helps a lot. > > Since you said that

10/19/21

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