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Alexandros Stamatakis
Mar 26
Workshop on Biodiversity Genomics in Crete - May 2025
Dear Users of our software tools, Are you looking for a good excuse to visit Crete? Join us for the
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Workshop on Biodiversity Genomics in Crete - May 2025
Dear Users of our software tools, Are you looking for a good excuse to visit Crete? Join us for the
Mar 26
Alexandros Stamatakis
Mar 19
raxtax: a novel tool for taxonomic classification
Dear Users Check out raxtax, our new open-source tool for taxonomic classification of barcoding
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raxtax: a novel tool for taxonomic classification
Dear Users Check out raxtax, our new open-source tool for taxonomic classification of barcoding
Mar 19
Alexandros Stamatakis
Feb 24
LEGEND conference on Machine Learning for Evolutionary Genomics Data - French Alps - Dec 8-12 2025
Dear Users of our tools, The second edition of our LEGEND conference on Machine Learning for
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LEGEND conference on Machine Learning for Evolutionary Genomics Data - French Alps - Dec 8-12 2025
Dear Users of our tools, The second edition of our LEGEND conference on Machine Learning for
Feb 24
Alexandros Stamatakis
10/21/24
Applications for 2025 computational molecular evolution summer school close in 10 days
Dear Users of our software tools, Applications are still open for the 2025 school on computational
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Applications for 2025 computational molecular evolution summer school close in 10 days
Dear Users of our software tools, Applications are still open for the 2025 school on computational
10/21/24
Alexandros Stamatakis
10/8/24
Applications for 2025 computational molecular evolution summer school close in 3 weeks
Dear Users of our software tools, Applications are still open for the 2025 school on computational
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Applications for 2025 computational molecular evolution summer school close in 3 weeks
Dear Users of our software tools, Applications are still open for the 2025 school on computational
10/8/24
Alexandros Stamatakis
9/17/24
Registrations for 2025 computational molecular evolution summer school are open
Dear Users of our software tools, Registrations are open for the 2025 school on computational
unread,
Registrations for 2025 computational molecular evolution summer school are open
Dear Users of our software tools, Registrations are open for the 2025 school on computational
9/17/24
Alexandros Stamatakis
8/7/24
Registrations for 2025 computational molecular evolution summer school are open
Dear Users of our software tools, Registrations are open for the 2025 school on computational
unread,
Registrations for 2025 computational molecular evolution summer school are open
Dear Users of our software tools, Registrations are open for the 2025 school on computational
8/7/24
Ziv Lieberman
,
Alexandros Stamatakis
3
8/6/24
Generating consensus trees directly prior to run completion
Hi Alexander, Of course, thank you! I had just read this incorrectly. Thank you for pointing me back
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Generating consensus trees directly prior to run completion
Hi Alexander, Of course, thank you! I had just read this incorrectly. Thank you for pointing me back
8/6/24
Guoyi Zhang
, …
Alexandros Stamatakis
3
7/22/24
Compile error for version 1.5.1
Thank you so much Tobias, much appreciated. Alexis On 20.07.24 00:09, Tobias Senoner wrote: > Hi,
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Compile error for version 1.5.1
Thank you so much Tobias, much appreciated. Alexis On 20.07.24 00:09, Tobias Senoner wrote: > Hi,
7/22/24
María Valerio
,
Alexandros Stamatakis
3
3/6/24
ExaBayes error
I am in fact running it on a cluster. I have already contacted the responsible staff but their
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ExaBayes error
I am in fact running it on a cluster. I have already contacted the responsible staff but their
3/6/24
Alexandros Stamatakis
1/16/24
Crete May 2024 - Machine Learning for Evolutionary Genomics Data
Dear Users of our Software, Sorry for bothering you with some event advertisement again via this list
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Crete May 2024 - Machine Learning for Evolutionary Genomics Data
Dear Users of our Software, Sorry for bothering you with some event advertisement again via this list
1/16/24
Shoyo Sato
,
Alexandros Stamatakis
4
1/11/24
exabayes consense issue
Dear Shoyo, I am afraid not, but I am ccing Alexey who has developed RAxML-NG. Alexey, given the
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exabayes consense issue
Dear Shoyo, I am afraid not, but I am ccing Alexey who has developed RAxML-NG. Alexey, given the
1/11/24
ExaBayes
12/1/23
recent spam events
Dear exabayes users, we are sorry to see that this google group has been abused as a platform for
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recent spam events
Dear exabayes users, we are sorry to see that this google group has been abused as a platform for
12/1/23
Alexandros Stamatakis
11/15/23
Two weeks remaining to apply for 2024 Summer School on Computational Molecular Evolution
Dear Users of our software tools, The deadline for applications to our 14th summer school on
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Two weeks remaining to apply for 2024 Summer School on Computational Molecular Evolution
Dear Users of our software tools, The deadline for applications to our 14th summer school on
11/15/23
Alexandros Stamatakis
10/26/23
Applications for 2024 Summer School on Computational Molecular Evolution are open
Dear Users of our software tools, The applications for our 14th summer school on COmputational
unread,
Applications for 2024 Summer School on Computational Molecular Evolution are open
Dear Users of our software tools, The applications for our 14th summer school on COmputational
10/26/23
gang liu
, …
Alexandros Stamatakis
9
9/4/23
parsing file aln.part
Thanks a lot Mark, I will try to get in touch with Andre such that he fixes it. Alexis On 01.09.23 22
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parsing file aln.part
Thanks a lot Mark, I will try to get in touch with Andre such that he fixes it. Alexis On 01.09.23 22
9/4/23
Alexandros Stamatakis
7/11/23
One PostDoc Positions in my new research group in Crete
Dear Users of our Software, Please accept my apologies that I am slightly misusing our software
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One PostDoc Positions in my new research group in Crete
Dear Users of our Software, Please accept my apologies that I am slightly misusing our software
7/11/23
David Lohman
,
Alexandros Stamatakis
2
4/10/23
Odd LnPr traces
Hi David, Could you also send me what the LnL trace looks like? It could be that the MCMC is sampling
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Odd LnPr traces
Hi David, Could you also send me what the LnL trace looks like? It could be that the MCMC is sampling
4/10/23
Pablo Aguado
,
Alexandros Stamatakis
3
3/16/23
Partitions question ExaBayes 1.4.1
Thank you very much for your reply Alexis, understood. Warm regards, P.Aguado-Ramsay El jue, 16 mar
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Partitions question ExaBayes 1.4.1
Thank you very much for your reply Alexis, understood. Warm regards, P.Aguado-Ramsay El jue, 16 mar
3/16/23
Alexandros Stamatakis
3/2/23
Two PhD Positions in my new research group in Crete
Dear Users of our Software, Please accept my apologies that I am slightly misusing our software
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Two PhD Positions in my new research group in Crete
Dear Users of our Software, Please accept my apologies that I am slightly misusing our software
3/2/23
Tobias Senoner
,
Alexandros Stamatakis
2
3/1/23
Optimize ExaBayes run
Hi Tobias, > I am currently running ExaBays for about 1.5K sequences. It is running > now for
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Optimize ExaBayes run
Hi Tobias, > I am currently running ExaBays for about 1.5K sequences. It is running > now for
3/1/23
Angélica Gallego Narbón
,
Alexandros Stamatakis
5
2/18/23
ExaBayes error parsing
I´ll give it a try, thank you! El sábado, 18 de febrero de 2023 a las 20:16:17 UTC+1, alexandros...@
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ExaBayes error parsing
I´ll give it a try, thank you! El sábado, 18 de febrero de 2023 a las 20:16:17 UTC+1, alexandros...@
2/18/23
Alexandros Stamatakis
1/20/23
Two PostDoc Positions in my new research group in Crete
Dear Users of our Software, Please accept my apologies that I am slightly misusing our software
unread,
Two PostDoc Positions in my new research group in Crete
Dear Users of our Software, Please accept my apologies that I am slightly misusing our software
1/20/23
Ivan Koludarov
,
Alexandros Stamatakis
2
11/7/22
Phyllip body incorrect error - what are the exact format requirements that exabayes needs?
Dear Ivan, Can you send me an example MSA file causing this error. As far as I remember ExaBayes
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Phyllip body incorrect error - what are the exact format requirements that exabayes needs?
Dear Ivan, Can you send me an example MSA file causing this error. As far as I remember ExaBayes
11/7/22
Alexandros Stamatakis
10/25/22
Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st
Dear users of our Tools, Last call for applications to our 2023 version of the summer school on
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Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st
Dear users of our Tools, Last call for applications to our 2023 version of the summer school on
10/25/22
Alexandros Stamatakis
10/7/22
Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st
Dear users of our Tools, Last call for applications to our 2023 version of the summer school on
unread,
Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st
Dear users of our Tools, Last call for applications to our 2023 version of the summer school on
10/7/22
Alexandros Stamatakis
2
9/12/22
Applications for 2023 school on Computational Molecular Evolution are open
Here is a reminder, applications for our summer school will close on November 1st 2022. Alexis On
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Applications for 2023 school on Computational Molecular Evolution are open
Here is a reminder, applications for our summer school will close on November 1st 2022. Alexis On
9/12/22
Alexandros Stamatakis
5/31/22
Primary and Secondary school outreach Material - The Aegean Archipelago: a living laboratory of evolutionary biology
Dear Users of our Bioinformatics tools, Recently, we have put together 3 games for primary school
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Primary and Secondary school outreach Material - The Aegean Archipelago: a living laboratory of evolutionary biology
Dear Users of our Bioinformatics tools, Recently, we have put together 3 games for primary school
5/31/22
zjche...@gmail.com
,
Alexandros Stamatakis
2
4/6/22
compile error for exabayes-1.5.1 MPI version
This looks like some MPI installation issue, not something related to Exabayes itself. Do you have a
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compile error for exabayes-1.5.1 MPI version
This looks like some MPI installation issue, not something related to Exabayes itself. Do you have a
4/6/22
zjche...@gmail.com
,
Alexandros Stamatakis
4
10/19/21
PartitionFinder model selection for exabayes
Dear Jiachen, > Thanks very much for your reply, it helps a lot. > > Since you said that
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PartitionFinder model selection for exabayes
Dear Jiachen, > Thanks very much for your reply, it helps a lot. > > Since you said that
10/19/21