ExaBayes

1–30 of 117

0 selected

Pablo Aguado, Alexandros Stamatakis3

Mar 16

Partitions question ExaBayes 1.4.1

Thank you very much for your reply Alexis, understood. Warm regards, P.Aguado-Ramsay El jue, 16 mar

unread,

Partitions question ExaBayes 1.4.1

Thank you very much for your reply Alexis, understood. Warm regards, P.Aguado-Ramsay El jue, 16 mar

Mar 16

Alexandros Stamatakis

Mar 2

Two PhD Positions in my new research group in Crete

Dear Users of our Software, Please accept my apologies that I am slightly misusing our software

unread,

Two PhD Positions in my new research group in Crete

Dear Users of our Software, Please accept my apologies that I am slightly misusing our software

Mar 2

Tobias Senoner, Alexandros Stamatakis2

Mar 1

Optimize ExaBayes run

Hi Tobias, > I am currently running ExaBays for about 1.5K sequences. It is running > now for

unread,

Optimize ExaBayes run

Hi Tobias, > I am currently running ExaBays for about 1.5K sequences. It is running > now for

Mar 1

Angélica Gallego Narbón, Alexandros Stamatakis5

Feb 18

ExaBayes error parsing

I´ll give it a try, thank you! El sábado, 18 de febrero de 2023 a las 20:16:17 UTC+1, alexandros...@

unread,

ExaBayes error parsing

I´ll give it a try, thank you! El sábado, 18 de febrero de 2023 a las 20:16:17 UTC+1, alexandros...@

Feb 18

Alexandros Stamatakis

Jan 20

Two PostDoc Positions in my new research group in Crete

Dear Users of our Software, Please accept my apologies that I am slightly misusing our software

unread,

Two PostDoc Positions in my new research group in Crete

Dear Users of our Software, Please accept my apologies that I am slightly misusing our software

Jan 20

Ivan Koludarov, Alexandros Stamatakis2

11/7/22

Phyllip body incorrect error - what are the exact format requirements that exabayes needs?

Dear Ivan, Can you send me an example MSA file causing this error. As far as I remember ExaBayes

unread,

Phyllip body incorrect error - what are the exact format requirements that exabayes needs?

Dear Ivan, Can you send me an example MSA file causing this error. As far as I remember ExaBayes

11/7/22

Alexandros Stamatakis

10/25/22

Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st

Dear users of our Tools, Last call for applications to our 2023 version of the summer school on

unread,

Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st

Dear users of our Tools, Last call for applications to our 2023 version of the summer school on

10/25/22

Alexandros Stamatakis

10/7/22

Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st

Dear users of our Tools, Last call for applications to our 2023 version of the summer school on

unread,

Last call: Applications for 2023 school on Computational Molecular Evolution - deadline November 1st

Dear users of our Tools, Last call for applications to our 2023 version of the summer school on

10/7/22

Alexandros Stamatakis2

9/12/22

Applications for 2023 school on Computational Molecular Evolution are open

Here is a reminder, applications for our summer school will close on November 1st 2022. Alexis On

unread,

Applications for 2023 school on Computational Molecular Evolution are open

Here is a reminder, applications for our summer school will close on November 1st 2022. Alexis On

9/12/22

Alexandros Stamatakis

5/31/22

Primary and Secondary school outreach Material - The Aegean Archipelago: a living laboratory of evolutionary biology

Dear Users of our Bioinformatics tools, Recently, we have put together 3 games for primary school

unread,

Primary and Secondary school outreach Material - The Aegean Archipelago: a living laboratory of evolutionary biology

Dear Users of our Bioinformatics tools, Recently, we have put together 3 games for primary school

5/31/22

zjche...@gmail.com, Alexandros Stamatakis2

4/6/22

compile error for exabayes-1.5.1 MPI version

This looks like some MPI installation issue, not something related to Exabayes itself. Do you have a

unread,

compile error for exabayes-1.5.1 MPI version

This looks like some MPI installation issue, not something related to Exabayes itself. Do you have a

4/6/22

12/11/21

Compile error for version 1.5.1

My command is cd $srcdir/$pkgname-$pkgver ./configure --prefix=/usr make For details make --version

unread,

Compile error for version 1.5.1

My command is cd $srcdir/$pkgname-$pkgver ./configure --prefix=/usr make For details make --version

12/11/21

zjche...@gmail.com, Alexandros Stamatakis4

10/19/21

PartitionFinder model selection for exabayes

Dear Jiachen, > Thanks very much for your reply, it helps a lot. > > Since you said that

unread,

PartitionFinder model selection for exabayes

Dear Jiachen, > Thanks very much for your reply, it helps a lot. > > Since you said that

10/19/21

Mael Glon, … Alexandros Stamatakis8

10/7/20

credibleSet only producing one tree

Great, thank you both for your help! On Wednesday, October 7, 2020 at 1:39:19 AM UTC-4 alexandros...@

unread,

credibleSet only producing one tree

Great, thank you both for your help! On Wednesday, October 7, 2020 at 1:39:19 AM UTC-4 alexandros...@

10/7/20

Dylan Cohen, Alexandros Stamatakis2

10/6/20

Exabayes Time calibrated trees

Hi Dylan, > I am wondering if there is a way to get time calibrated phylogeny with > confidence

unread,

Exabayes Time calibrated trees

Hi Dylan, > I am wondering if there is a way to get time calibrated phylogeny with > confidence

10/6/20

Dylan Cohen, … Dylan Cohen3

9/27/20

How do you fix a topology as a prior?

Hi Andre, Thanks for the comment, it is working now. Best, Dylan On Sun, Sep 27, 2020 at 12:07 AM

unread,

How do you fix a topology as a prior?

Hi Andre, Thanks for the comment, it is working now. Best, Dylan On Sun, Sep 27, 2020 at 12:07 AM

9/27/20

jiachen zhu, … Mark Miller3

7/14/20

error in cipres

Jiachen, Was this an attempt to restart a completed (timed out) run, or a new run? Mark On Tuesday,

unread,

error in cipres

Jiachen, Was this an attempt to restart a completed (timed out) run, or a new run? Mark On Tuesday,

7/14/20

Debajyoti Kabiraj, … Alexandros Stamatakis8

7/8/20

Error: parsing file part.txt failed; character has changed from '\3' to '/3'

Dear Debajyoti, Please have a look at the detailed manual: https://cme.h-its.org/exelixis/web/

unread,

Error: parsing file part.txt failed; character has changed from '\3' to '/3'

Dear Debajyoti, Please have a look at the detailed manual: https://cme.h-its.org/exelixis/web/

7/8/20

Guarino Colli, Andre Aberer3

6/8/20

Compilation error (ExaBayes 1.5) on Ubuntu 20.04

Thanks a lot, Andre! This allowed me to compile Exabayes. On Sunday, June 7, 2020 at 4:30:19 PM UTC-3

unread,

Compilation error (ExaBayes 1.5) on Ubuntu 20.04

Thanks a lot, Andre! This allowed me to compile Exabayes. On Sunday, June 7, 2020 at 4:30:19 PM UTC-3

6/8/20

Debajyoti Kabiraj, … Alexandros Stamatakis3

6/5/20

Exabayes Error in Cipres: Exited with exit code 134

Please see the reply by Andre on this issue. Alexis On 06.06.20 05:03, Jing Li Xuan wrote: > Hello

unread,

Exabayes Error in Cipres: Exited with exit code 134

Please see the reply by Andre on this issue. Alexis On 06.06.20 05:03, Jing Li Xuan wrote: > Hello

6/5/20

Ivan Koludarov, … Alexey Kozlov6

5/12/20

Error with compiling

Hi Alexey, It worked, so many thanks! Best, Ivan On Saturday, 9 May 2020 14:09:31 UTC+2, Alexey

unread,

Error with compiling

Hi Alexey, It worked, so many thanks! Best, Ivan On Saturday, 9 May 2020 14:09:31 UTC+2, Alexey

5/12/20

David Lohman, Alexandros Stamatakis4

5/4/20

great :-) Alexis On 05.05.20 04:13, David Lohman wrote: > Dear Alexandros, > > I downloaded

unread,

great :-) Alexis On 05.05.20 04:13, David Lohman wrote: > Dear Alexandros, > > I downloaded

5/4/20

David Lohman, Alexandros Stamatakis3

5/3/20

Model specification for each partition

Dear Alexis, Thanks! Best, David Lohman On Sunday, May 3, 2020 at 5:27:46 AM UTC-4, Alexandros

unread,

Model specification for each partition

Dear Alexis, Thanks! Best, David Lohman On Sunday, May 3, 2020 at 5:27:46 AM UTC-4, Alexandros

5/3/20

Tobias vE, … Dai Nguyen11

4/14/20

Several Errors when running ExaBayes

Dear Prof. Alexis, I already have a MPICH2. I tried install Exbayes following the Exabayes manual but

unread,

Several Errors when running ExaBayes

Dear Prof. Alexis, I already have a MPICH2. I tried install Exbayes following the Exabayes manual but

4/14/20

Alexandros Stamatakis

10/31/19

Application deadline (NOV 18) Summer School on Computational Molecular Evolution Crete 2020 approaching

Dear Users of our Software, Applications for our 12th summer school on computational molecular

unread,

Application deadline (NOV 18) Summer School on Computational Molecular Evolution Crete 2020 approaching

Dear Users of our Software, Applications for our 12th summer school on computational molecular

10/31/19

Alexandros Stamatakis

10/22/19

Summer School Computational Molecular Evolution Crete May 10 - May 21 2020

Dear Users of our Software, Applications for our 12th summer school on computational molecular

unread,

Summer School Computational Molecular Evolution Crete May 10 - May 21 2020

Dear Users of our Software, Applications for our 12th summer school on computational molecular

10/22/19

Matthew Prebus, Alexandros Stamatakis2

10/16/19

convergence issues

Hi Matthew, Sorry for the late reply, I was on parental leave. It may well be that your dataset does

unread,

convergence issues

Hi Matthew, Sorry for the late reply, I was on parental leave. It may well be that your dataset does

10/16/19

Xavi Grau, … Andre Aberer6

7/31/19

GTR+Gamma model for amino acid data

Alexis is right on both accounts. -Andre Alexandros Stamatakis writes: > I am not sure actually, I

unread,

GTR+Gamma model for amino acid data

Alexis is right on both accounts. -Andre Alexandros Stamatakis writes: > I am not sure actually, I

7/31/19

Maripaz Montero, Andre Aberer2

7/31/19

Levels of Parallelism

Hi Maripaz, the given dataset is too small (particularly in terms of base pairs) to use a lot of

unread,

Levels of Parallelism

Hi Maripaz, the given dataset is too small (particularly in terms of base pairs) to use a lot of

7/31/19

melisa eliana magallanes, … Miller, Mark11

7/16/19

consense trees on CIPRES

The service has been restored, please let me know if you have any issues using consense in the

unread,

consense trees on CIPRES

The service has been restored, please let me know if you have any issues using consense in the

7/16/19

Search

Clear search

Close search

Google apps

Main menu