Detected phenotypes with 2 unique values - 0 and 1 - considering them as binary phenotypes... re-encoding them into 1 and 2
Successfully written phenotypes and 11 covariates across 294694 individuals
Processing chromosome 7...
Loading required package: epactsR
Loading required package: epactsR
Loading required package: epactsR
Loading required package: epactsR
Loading required package: epactsR
Error in obj.SA.null$XV %*% G : non-conformable arguments
Calls: func -> ScoreTest_wSaddleApprox_NewNR
Execution halted
make: *** spa2/test_output_file_chr7.7.114200000.120000000.epacts] Error 1
Error in running make -f spa2/test_output_file_chr7.Makefile -j 10. Exit code is 2
vinodh