Segmentation fault

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Aditya Yinaganti

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May 25, 2022, 7:19:27 AM5/25/22
to EPACTS
I have been trying to use EPACTS for single variant test but this error is coming whenever I try to use it. 
I would be grateful for the help.
 
*** caught segfault ***
address 0x7f0824ba7050, cause 'memory not mapped'

Traceback:
 1: .Call("readVcf", vcf, region, field, passOnly, ind, NULL)
An irrecoverable exception occurred. R is aborting now ...
make: *** [/gpfs/data/user/aditya/test.21.10000001.20000000.epacts] Segmentation fault (core dumped)
make: *** Waiting for unfinished jobs....
 *** caught segfault ***
address 0x7f0824ba7050, cause 'memory not mapped'

Traceback:
 1: .Call("readVcf", vcf, region, field, passOnly, ind, NULL)
An irrecoverable exception occurred. R is aborting now ...
make: *** [/gpfs/data/user/aditya/test.21.10000001.20000000.epacts] Segmentation fault (core dumped)
make: *** Waiting for unfinished jobs....
Error: cannot allocate vector of size 101.2 Gb
Execution halted
make: *** [/gpfs/data/user/aditya/test.21.20000001.30000000.epacts] Error 1
Error in running make -f /gpfs/data/user/aditya/test.Makefile -j 2. Exit code is 2
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