group-wise tests differences and references

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salvi...@gmail.com

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Oct 19, 2021, 6:21:44 AM10/19/21
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Hi
I'm applying gene-burden tests with correction for covariates and binary traits

I found these types of tests. Could you please confirm the references for each test?

b.collapse: is it the CMC test as reported in https://doi.org/10.1016/J.AJHG.2008.06.024?

burden: which type of test? and why different results from collapse?

b.wcnt: reference? is it a weighted rare variant score similar to Madsen?

VT: is this the correct reference? https://doi.org/10.1016/J.AJHG.2010.04.005

thank you very much

Fred Boehm

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May 28, 2023, 3:53:11 PM5/28/23
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Did you happen to get a response to these questions? I, too, would like to understand the tests better by reading the original reports.

Thanks!

fred
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