EPACTS

Dear Sir/Madam, Would you please tell me on how to include samples with gender info unavailable for

Hello, I am currently getting this error when I am running single variant analysis in EPACTS

Dear Sir/Madam, I was able to run a binary variant score test with the example

Hi, I'm trying to run SKAT genes-set association by creating single grp file of variants from ~

Hi I have a problem running EPACTS, while performing Single Variant EMMAX Association Analysis. I

When running skat-o in epacts, it gives me the following error. Where can I install mmskat from? I

Hi Tanya, Thank you for your extremely prompt response. Since the gene group file has some very

Dear Dr Kang, I am trying to generate a .grp file using -make-group on the EPACTS version 3.2.6 My

Hello everyone I received some help from my IT department - below is a workaround rather than a root-

Hi. I always appreciate the EPACTS software. The OS of my PC is CentOS 8. In this PC, I tried to

Just a quick note: I had to add Passive=>1 to the epacts-download script to enable testing and

Hello everyone, I have a problem with firth bias corrected association for single variant analysis. I

I get the exact same error on Ubuntu 18.04 Op maandag 23 april 2018 12:56:37 UTC+2 schreef Dash -: Hi

After including the FileHandle package in the epacts.pm script a new error is shown: ERROR: Interval

Hi, When running epacts single-varaint spa2 module, i am hitting a road block. Any pointers will be

Hi everyone, when i ran EPACTS, it showed errors like this: Error in which((varAC > 0) & (MAF

Hi Dr. Hyun Min Kang., I found that in the EMMAX beta as of March 7, 2010 to create kinship matrix,

Dear all, Do you have a recommended paper, document or URI to cite the EPACTS software package? I am

Dear all, is there a way of applying genomic control after a GWAS carried out with EPACTS? Otherwise,

Hi all, I have a question about the EPACTS group-wise burden test, the output files contains several

Thanks for all your help Jongyun. It still not working. I guess it is due to my own data. On

Thank you very much! On Thursday, April 16, 2020 at 3:31:03 PM UTC+2, Hyun Min Kang wrote: The non-

I think you need to install ghostscript. In ubuntu, you can run sudo apt-get install ghostscript Hyun

Hi! how I can implement the common+rare skat analysis with the already available R script "

It's been 3 years now since this issue has been raised and I have just encountered the same issue

I have the same question, did you find a way to calculate R2? Thanks! Dan On Thursday, August 8, 2019

Hi EPACTS developers and users, I am running the epacts with about 10K genes and ~200 groups (

Dear All, I got some error as follows when run 'make' in installing EPACTS： make[2]: *** No

Hi Asahi, I encountered the same problem in installing EPACTS, have you solved it? Could you give me

I'd like to ask for your kind help with the installation of EPACTS. There is an error as follows