ImportErrors of 'gzread' when running 'emirge_amplicon.py'

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xue....@gmail.com

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Apr 3, 2016, 12:03:53 AM4/3/16
to EMIRGE users

Hi,


I installed EMIRGE following the instrcution. The orginal 'emirge.py' seems work well, but the new version 'emrige_amplicon.py' that for large dataset got errors:


$ ./emirge_amplicon.py
Traceback (most recent call last):
File "./emirge_amplicon.py", line 61, in
import emirge_amplicon as _emirge
File "build/bdist.linux-x86_64/egg/_emirge_amplicon.py", line 7, in
File "build/bdist.linux-x86_64/egg/_emirge_amplicon.py", line 6, in __bootstrap

ImportError: /Home/ii/yaxinx/.python-eggs/EMIRGE-0.60.2a6-py2.7-linux-x86_64.egg-tmp/emirge_amplicon.so: undefined symbol: gzread



Anyone know how to fix it? Thanks very much.


Chris Miller

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Apr 9, 2016, 1:26:47 PM4/9/16
to EMIRGE users, xue....@gmail.com
For anyone with the same error, this has been addressed here:


Chris

On Saturday, April 2, 2016 at 10:03:53 PM UTC-6, 
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