Hello,
I encountered an error which seemed like to be related to gzip in the process. Could you help me to solve this problem?
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...merging 957|FJ529953.1.1448 into 510|FJ439862.1.1430 (99.65% ID over 851 columns) in 0.000 seconds
...merging 729|JN003081.1.1258 into 528|FJ822651.1.1379 (100.00% ID over 865 columns) in 0.000 seconds
...merging 981|EF018085.1.1400 into 528|FJ822651.1.1379 (100.00% ID over 705 columns) in 0.000 seconds
...merging 539|HQ114124.1.1484 into 1410|JQ801046.1.1487 (99.83% ID over 584 columns) in 0.000 seconds
...merging 526|HQ592595.1.1479 into 758|FJ439867.1.1481 (100.00% ID over 1140 columns) in 0.000 seconds
...merging 1016|KT182562.1.1463 into 604|CU922289.1.1332 (100.00% ID over 857 columns) in 0.000 seconds
...merging 1401|FJ889304.1.1453 into 875|HM069098.1.1439 (99.69% ID over 960 columns) in 0.000 seconds
...merging 1229|KJ191896.1.1451 into 971|KC541017.1.1484 (99.87% ID over 785 columns) in 0.000 seconds
...merging 1220|KF697565.1.1227 into 971|KC541017.1.1484 (99.57% ID over 931 columns) in 0.000 seconds
Writing new fasta file for iteration 0 at Mon Nov 28 17:51:58 2016...
removed 215 sequences after merging
sequences remaining for iteration 00: 149
DONE Clustering sequences for iteration 0 at Mon Nov 28 17:51:58 2016 [0:00:01.893137]...
Writing priors and probN to disk for iteration 0 at Mon Nov 28 17:51:58 2016...
gzip: /media/wentso/WD4TB/Metagenome_DHS_additional/2.1.EMIRG/U528_EMIRGE/iter.00/probN.pkl.gz: Function not implemented
Traceback (most recent call last):
File "/usr/local/bin/emirge.py", line 4, in <module>
__import__('pkg_resources').run_script('EMIRGE==0.61.0', 'emirge.py')
File "build/bdist.linux-x86_64/egg/pkg_resources/__init__.py", line 744, in run_script
File "build/bdist.linux-x86_64/egg/pkg_resources/__init__.py", line 1506, in run_script
File "/usr/local/lib/python2.7/dist-packages/EMIRGE-0.61.0-py2.7-linux-x86_64.egg/EGG-INFO/scripts/emirge.py", line 1697, in <module>
File "/usr/local/lib/python2.7/dist-packages/EMIRGE-0.61.0-py2.7-linux-x86_64.egg/EGG-INFO/scripts/emirge.py", line 1688, in main
File "/usr/local/lib/python2.7/dist-packages/EMIRGE-0.61.0-py2.7-linux-x86_64.egg/EGG-INFO/scripts/emirge.py", line 1439, in do_iterations
File "/usr/local/lib/python2.7/dist-packages/EMIRGE-0.61.0-py2.7-linux-x86_64.egg/EGG-INFO/scripts/emirge.py", line 510, in do_iteration
File "/usr/lib/python2.7/subprocess.py", line 540, in check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command 'gzip -f /media/wentso/WD4TB/Metagenome_DHS_additional/2.1.EMIRG/U528_EMIRGE/iter.00/probN.pkl' returned non-zero exit status 2
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