error message running e2spt_refine_new.py

[Maia Azubel]

I was running

e2spt_refine_new.py --ptcls sets/ncp.lst --ref spt_49/threed_01.hdf --goldcontinue --iters p,p,p,t,p,p,t,r,d  --parallel=thread:72 --threads=72 --tophat=localwiener --startres=10

It finished p,p,p,t,p before we had a power outage.

I wanted to continue from where it stopped but now, I'm getting an error message.

e2version.py

EMAN 2.99 ( GITHUB: 2021-09-13 10:49 - commit: ba39969d8 )

Your Python version is: 3.7.9

e2spt_refine_new.py --ptcls sets/ncp.lst --ref spt_69/three_05.hdf --loadali2d spt_69/aliptcls2d_05.lst --loadali3d spt_69/aliptcls3d_05.lst --goldcontinue --parallel=thread:72 --threads=72 --tophat=localwiener --iter p,t,r,d

Writing in spt_70...

Gathering metadata...

 109013/109013

Preparing references...

Traceback (most recent call last):

  File "/data/maia2/miniconda3/envs/eman2/bin/e2spt_refine_new.py", line 349, in <module>

    main()

  File "/data/maia2/miniconda3/envs/eman2/bin/e2spt_refine_new.py", line 103, in main

    er=EMData(refs["even"],0,True)

  File "/data/maia2/miniconda3/envs/eman2/lib/python3.7/site-packages/EMAN2.py", line 2600, in db_emd_init

    self.read_image_c(*parms)

RuntimeError: FileAccessException at /data/maia2/eman2/libEM/io/hdfio2.cpp:464: error with 'spt_69/three_05_even.hdf': 'cannot access file 'spt_69/three_05_even.hdf'' caught

[Judy Huang]

Maybe a typo issue? 

I think spt_69/threed_05_even.hdf instead of spt_69/three_05_even.hdf might work.

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