export to img

[Zaphod Beeblebrox]

Dear all, 

I am still missing the good old eman boxer. There was the easy option to write the particles from each micrograph directly as .img.  (write output)
How can I do this with the newer version?

best

[Ludtke, Steven J.]

e2boxer.py --help

will show all of the command line options. One of these is --write_ptcls

In the days of boxer in EMAN1, people would typically have projects with 10-50 micrographs, and extensive manual handling of each micrograph was reasonable. That strategy is just not practical in modern projects with 1000-10000 micrographs, so all of the workflows were streamlined, and targeted at making sure information about your workflow is properly recorded.

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Steven Ludtke, Ph.D. <slu...@bcm.edu>                      Baylor College of Medicine
Charles C. Bell Jr., Professor of Structural Biology        Dept. of Biochemistry 
Deputy Director, Advanced Technology Cores                  and Molecular Pharmacology
Academic Director, CryoEM Core
Co-Director CIBR Center

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