error messages are here

[Chunyan Wang]

-- CMAKE_PREFIX_PATH="/home/cw785/.conda/envs/eman2;/home/cw785/.conda/envs/eman2/.."

-- Python3_EXECUTABLE="/home/cw785/.conda/envs/eman2/bin/python3.11"

-- Python3_LIBRARIES="/home/cw785/.conda/envs/eman2/lib/libpython3.11.so"

-- Python3_INCLUDE_DIRS="/home/cw785/.conda/envs/eman2/include/python3.11"

-- Python3_SITELIB="/home/cw785/.conda/envs/eman2/lib/python3.11/site-packages"

-- PYTHON_LIB_SHARED="0"

-- CMAKE_CXX_COMPILER_ID="GNU"

Boost_VERSION: 107800

Boost_LIBRARIES:   /home/cw785/.conda/envs/eman2/lib/libboost_python311.so;/home/cw785/.conda/envs/eman2/lib/libboost_numpy311.so

Boost_INCLUDE_DIR: /home/cw785/.conda/envs/eman2/include

-- HDF5_LIBRARY="/home/cw785/.conda/envs/eman2/lib/libhdf5.so"

-- TIFF_LIBRARIES="/home/cw785/.conda/envs/eman2/lib/libtiff.so"

-- JPEG_LIBRARIES="/home/cw785/.conda/envs/eman2/lib/libjpeg.so"

-- PNG_LIBRARIES="/home/cw785/.conda/envs/eman2/lib/libpng.so;/home/cw785/.conda/envs/eman2/lib/libz.so"

CMake Error at /vast/palmer/home.mccleary/cw785/.conda/envs/eman2/share/cmake-3.29/Modules/FindPackageHandleStandardArgs.cmake:230 (message):

  Could NOT find OpenGL (missing: OPENGL_opengl_LIBRARY OPENGL_INCLUDE_DIR

  OpenGL)

Call Stack (most recent call first):

  /vast/palmer/home.mccleary/cw785/.conda/envs/eman2/share/cmake-3.29/Modules/FindPackageHandleStandardArgs.cmake:600 (_FPHSA_FAILURE_MESSAGE)

  /vast/palmer/home.mccleary/cw785/.conda/envs/eman2/share/cmake-3.29/Modules/FindOpenGL.cmake:579 (FIND_PACKAGE_HANDLE_STANDARD_ARGS)

  cmake/OpenGL.cmake:3 (find_package)

  libEM/CMakeLists.txt:162 (include

[Ludtke, Steven J.]

Most CryoEM workstations will have OpenGL libraries installed as a matter of course, as they are used by so many visualization packages. If you don't have an nvidia graphics card and the associated drivers (including accelerated OpenGL), you may wish to install Mesa (make sure to get the 'devel' packages too if they are separate on the platform you're using).

---

Steven Ludtke, Ph.D. <slu...@bcm.edu>                      Baylor College of Medicine
Charles C. Bell Jr., Professor of Structural Biology        Dept. of Biochemistry 
Deputy Director, Advanced Technology Cores                  and Molecular Pharmacology
Academic Director, CryoEM Core
Co-Director CIBR Center

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[Chunyan Wang]

It is working now. 

[Chunyan Wang]

Thanks it is working. 

On Sunday, June 2, 2024 at 10:49:29 AM UTC-4 Ludtke, Steven J. wrote: