ok so, this seems to have gotten me to the next step which I'm not sure is closer to actually using edX CMS or LMS. Below is the output which seems long (is this normal?). Not sure how to proceed other than a complete reinstall. Any ideas?
meded$: rake cms
Node requirements unchanged, nothing to install
Ruby requirements unchanged, nothing to install
pip install --exists-action w -r requirements/edx/pre.txt
Downloading/unpacking numpy==1.6.2 (from -r requirements/edx/pre.txt (line 3))
Running setup.py egg_info for package numpy
Running from numpy source directory.non-existing path in 'numpy/distutils': 'site.cfg'
F2PY Version 2
blas_opt_info:
FOUND:
extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
define_macros = [('NO_ATLAS_INFO', 3)]
extra_compile_args = ['-msse3', '-I/System/Library/Frameworks/vecLib.framework/Headers']
lapack_opt_info:
FOUND:
extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
define_macros = [('NO_ATLAS_INFO', 3)]
extra_compile_args = ['-msse3']
build_src
building py_modules sources
building library "npymath" sources
customize NAGFCompiler
Could not locate executable f95
customize AbsoftFCompiler
Could not locate executable f90
Could not locate executable f77
customize IBMFCompiler
Could not locate executable xlf90
Could not locate executable xlf
customize IntelFCompiler
Could not locate executable ifort
Could not locate executable ifc
customize GnuFCompiler
Could not locate executable g77
customize Gnu95FCompiler
Found executable /usr/local/bin/gfortran
customize Gnu95FCompiler
customize Gnu95FCompiler using config
C compiler: clang -fno-strict-aliasing -fno-common -dynamic -g -Os -pipe -fno-common -fno-strict-aliasing -fwrapv -mno-fused-madd -DENABLE_DTRACE -DMACOSX -DNDEBUG -Wall -Wstrict-prototypes -Wshorten-64-to-32 -DNDEBUG -g -Os -Wall -Wstrict-prototypes -DENABLE_DTRACE -arch i386 -arch x86_64 -pipe
compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/include -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c'
clang: _configtest.c
clang: warning: argument unused during compilation: '-mno-fused-madd'
clang _configtest.o -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
C compiler: clang -fno-strict-aliasing -fno-common -dynamic -g -Os -pipe -fno-common -fno-strict-aliasing -fwrapv -mno-fused-madd -DENABLE_DTRACE -DMACOSX -DNDEBUG -Wall -Wstrict-prototypes -Wshorten-64-to-32 -DNDEBUG -g -Os -Wall -Wstrict-prototypes -DENABLE_DTRACE -arch i386 -arch x86_64 -pipe
compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/include -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c'
clang: _configtest.c
clang: warning: argument unused during compilation: '-mno-fused-madd'
_configtest.c:1:5: warning: incompatible redeclaration of library function 'exp'
int exp (void);
^
_configtest.c:1:5: note: 'exp' is a builtin with type 'double (double)'
1 warning generated.
_configtest.c:1:5: warning: incompatible redeclaration of library function 'exp'
int exp (void);
^
_configtest.c:1:5: note: 'exp' is a builtin with type 'double (double)'
1 warning generated.
clang _configtest.o -o _configtest
success!
removing: _configtest.c _configtest.o _configtest
building extension "numpy.core._sort" sources
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/config.h' to sources.
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/_numpyconfig.h' to sources.
executing numpy/core/code_generators/generate_numpy_api.py
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/__multiarray_api.h' to sources.
numpy.core - nothing done with h_files = ['build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/config.h', 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/_numpyconfig.h', 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/__multiarray_api.h']
building extension "numpy.core.multiarray" sources
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/config.h' to sources.
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/_numpyconfig.h' to sources.
executing numpy/core/code_generators/generate_numpy_api.py
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/__multiarray_api.h' to sources.
numpy.core - nothing done with h_files = ['build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/config.h', 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/_numpyconfig.h', 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/__multiarray_api.h']
building extension "numpy.core.umath" sources
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/config.h' to sources.
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/_numpyconfig.h' to sources.
executing numpy/core/code_generators/generate_ufunc_api.py
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/__ufunc_api.h' to sources.
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/src/umath' to include_dirs.
numpy.core - nothing done with h_files = ['build/src.macosx-10.8-intel-2.7/numpy/core/src/umath/funcs.inc', 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/config.h', 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/_numpyconfig.h', 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/__ufunc_api.h']
building extension "numpy.core.scalarmath" sources
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/config.h' to sources.
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/_numpyconfig.h' to sources.
executing numpy/core/code_generators/generate_numpy_api.py
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/__multiarray_api.h' to sources.
executing numpy/core/code_generators/generate_ufunc_api.py
adding 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/__ufunc_api.h' to sources.
numpy.core - nothing done with h_files = ['build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/config.h', 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/_numpyconfig.h', 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/__multiarray_api.h', 'build/src.macosx-10.8-intel-2.7/numpy/core/include/numpy/__ufunc_api.h']
building extension "numpy.core._dotblas" sources
adding 'numpy/core/blasdot/_dotblas.c' to sources.
building extension "numpy.core.umath_tests" sources
building extension "numpy.core.multiarray_tests" sources
building extension "numpy.lib._compiled_base" sources
building extension "numpy.numarray._capi" sources
building extension "numpy.fft.fftpack_lite" sources
building extension "numpy.linalg.lapack_lite" sources
adding 'numpy/linalg/lapack_litemodule.c' to sources.
adding 'numpy/linalg/python_xerbla.c' to sources.
building extension "numpy.random.mtrand" sources
C compiler: clang -fno-strict-aliasing -fno-common -dynamic -g -Os -pipe -fno-common -fno-strict-aliasing -fwrapv -mno-fused-madd -DENABLE_DTRACE -DMACOSX -DNDEBUG -Wall -Wstrict-prototypes -Wshorten-64-to-32 -DNDEBUG -g -Os -Wall -Wstrict-prototypes -DENABLE_DTRACE -arch i386 -arch x86_64 -pipe
compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/include -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -c'
clang: _configtest.c
clang: warning: argument unused during compilation: '-mno-fused-madd'
clang _configtest.o -o _configtest
_configtest
failure.
removing: _configtest.c _configtest.o _configtest
building data_files sources
build_src: building npy-pkg config files
Installing collected packages: numpy
Found existing installation: numpy 1.6.1
Uninstalling numpy:
Exception:
Traceback (most recent call last):
File "/Library/Python/2.7/site-packages/pip-1.3.1-py2.7.egg/pip/basecommand.py", line 139, in main
status = self.run(options, args)
File "/Library/Python/2.7/site-packages/pip-1.3.1-py2.7.egg/pip/commands/install.py", line 271, in run
requirement_set.install(install_options, global_options, root=options.root_path)
File "/Library/Python/2.7/site-packages/pip-1.3.1-py2.7.egg/pip/req.py", line 1181, in install
requirement.uninstall(auto_confirm=True)
File "/Library/Python/2.7/site-packages/pip-1.3.1-py2.7.egg/pip/req.py", line 495, in uninstall
paths_to_remove.remove(auto_confirm)
File "/Library/Python/2.7/site-packages/pip-1.3.1-py2.7.egg/pip/req.py", line 1518, in remove
renames(path, new_path)
File "/Library/Python/2.7/site-packages/pip-1.3.1-py2.7.egg/pip/util.py", line 293, in renames
shutil.move(old, new)
File "/System/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/shutil.py", line 299, in move
os.unlink(src)
OSError: [Errno 13] Permission denied: '/System/Library/Frameworks/Python.framework/Versions/2.7/Extras/lib/python/numpy-1.6.1-py2.7.egg-info'
Storing complete log in /var/folders/m6/82gs55210dl0z3swqxg750yr0000gn/T/tmp_aPtx_
rake aborted!
Command failed with status (2): [pip install --exists-action w -r requireme...]
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/file_utils.rb:53:in `block in create_shell_runner'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/file_utils.rb:45:in `call'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/file_utils.rb:45:in `sh'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/file_utils_ext.rb:37:in `sh'
/Users/meded/edx_all/edx-platform/rakefiles/prereqs.rake:34:in `block (2 levels) in <top (required)>'
/Users/meded/edx_all/edx-platform/rakefiles/helpers.rb:40:in `when_changed'
/Users/meded/edx_all/edx-platform/rakefiles/prereqs.rake:32:in `block in <top (required)>'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:246:in `call'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:246:in `block in execute'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:241:in `each'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:241:in `execute'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:184:in `block in invoke_with_call_chain'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:177:in `invoke_with_call_chain'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:205:in `block in invoke_prerequisites'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:203:in `each'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:203:in `invoke_prerequisites'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:183:in `block in invoke_with_call_chain'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:177:in `invoke_with_call_chain'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:205:in `block in invoke_prerequisites'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:203:in `each'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:203:in `invoke_prerequisites'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:183:in `block in invoke_with_call_chain'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:177:in `invoke_with_call_chain'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/task.rb:170:in `invoke'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/application.rb:143:in `invoke_task'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/application.rb:101:in `block (2 levels) in top_level'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/application.rb:101:in `each'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/application.rb:101:in `block in top_level'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/application.rb:110:in `run_with_threads'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/application.rb:95:in `top_level'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/application.rb:73:in `block in run'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/application.rb:160:in `standard_exception_handling'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@global/gems/rake-10.0.4/lib/rake/application.rb:70:in `run'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@mitx/bin/ruby_noexec_wrapper:14:in `eval'
/Users/meded/.rvm/gems/ruby-1.9.3-p374@mitx/bin/ruby_noexec_wrapper:14:in `<main>'
Tasks: TOP => cms => install_prereqs => install_python_prereqs