Making only stats with prinseq

0 views
Skip to first unread message

k.ma...@gmail.com

unread,
Feb 25, 2015, 7:25:38 AM2/25/15
to Edwards...@googlegroups.com
Hello everyone,
I have a question regarding the analysis done by prinseq.
I made prinseq-lite analysis to get on the end only stats : -graph_data test -graph_stats ld,gc,qd,de,dn
but I have a problem of memory everytime. ANd I thin, it is because of the program generating the bad and fastq files.
Is it possible to avoid this process and ask only prinseq to have only the basics statics value from the input fastq.

Thanks in advance,
Reply all
Reply to author
Forward
0 new messages