riboPicker database index files

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sldol...@gmail.com

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Nov 18, 2013, 1:00:17 PM11/18/13
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I am stuck in riboPicker with the database files. I have created a folder with all of the index files and specified the full correct path in the config file, but I still get -

ERROR: cannot find all database files for database "ssr" in dir "/home/sganesh3/Desktop/ribopicker-standalone-0.4.3/db/".

This happens for all of the databases I have.

Each database has 8 files. For instance:

slr108.amb
slr108.ann
sl108.bwt
slr108.pac
sl108.rbwt
slr108.rpac
slr108.rsa
slr108.sa

The original fasta files are not in the database file (I don't know if they should be). What am I missing??

sldol...@gmail.com

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Nov 18, 2013, 4:24:43 PM11/18/13
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Fixed it. thanks.

dongf...@gmail.com

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Jan 12, 2015, 12:52:23 PM1/12/15
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Hi, Dude,
I met the same problem. Would you please tell me how did you fix it?
Thanks.
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