DECONSEQ

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lili.fa...@gmail.com

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Jul 25, 2016, 3:34:21 AM7/25/16
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Thank you very much for the very useful software “ DECONSEQ”

I have a question, my data is paired end sequences, but I couldn’t find paired-end option in deconseq manual.

As I read in bwa manual, “bwasw” accepts the mate file and performs paired-end alignment.

How about deconseq, can I use that for paired-end data? Is there any consideration while I am running the Deconseq for my paired-end data?
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