Error uploading files (Ubuntu 18.04, EDGE as docker)

[Леонид Солнцев]

I've installed EDGE.

But there is no dir for user in EDGE_input.

Also, when I navigate through dir in @select files@ menu, there are errors in apache log:

[Sat Dec 15 16:22:29.357450 2018] [cgi:error] [pid 174] [client 192.168.10.195:49528] AH01215: Can't return outside a subroutine at /home/edge/edge/edge_ui/cgi-bin/jqueryFileTree.cgi line 56., referer: http://192.168.10.27/

[Lo, Chien-Chi]

Hi,

 

The user directory for EDGE_input could be the permission issue on the host environment.   Please try opening up the directory permission if you run into trouble. (ex: set the directory into 0777 mode)

 

https://edge.readthedocs.io/en/develop/troubleshooting.html#edge-web-gui

 

For the upload in the docker based on ubuntu 18.04, we found it require specify the relative path for the cgi scripts. We have updated the associated scripts with the correct path. Please see the following Patch and see if it can fix your issue.

 

https://github.com/LANL-Bioinformatics/EDGE/commit/81453ce06dda2ff438a6c69941b1df009f9a88c6

 

Thanks,

Chienchi

--
You received this message because you are subscribed to the Google Groups "edge-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to edge-users+...@googlegroups.com.
To post to this group, send email to edge-...@googlegroups.com.
To view this discussion on the web visit https://groups.google.com/d/msgid/edge-users/68b5f1ce-3fbb-4757-b0e9-9f5d0c965f39%40googlegroups.com.
For more options, visit https://groups.google.com/d/optout.

[Леонид Солнцев]

Thanks for help.

And this patch is already applied to docker image?

суббота, 15 декабря 2018 г., 19:25:55 UTC+3 пользователь Леонид Солнцев написал:

[Lo, Chien-Chi]

No. It is on the github only.  Will do the docker update later.

 

If you cannot wait the docker image update, you can download the cgi codes from the github and use “docker cp” command to copy the downloaded script and replace the cgi scripts in the docker container.

 

Chienchi

--

You received this message because you are subscribed to the Google Groups "edge-users" group.
To unsubscribe from this group and stop receiving emails from it, send an email to edge-users+...@googlegroups.com.
To post to this group, send email to edge-...@googlegroups.com.

To view this discussion on the web visit https://groups.google.com/d/msgid/edge-users/8d1253ff-d62d-4a0c-a1c3-7633b6a5b99a%40googlegroups.com.