James server tomcat running but not running
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petera...@gmail.com
Sep 4, 2018, 4:56:03 PM9/4/18
to Edge Test Tool (ETT)
I'm using the AWS images and trying to configure them to work.
I installed the certificates on the Edge image and the James image. The Edge image seems to be working ok, i.e. apache will serve me some pages even in HTTPS. The James server does not seem to be working. When I run the startup.sh script it works ok. There are no error messages in the logs. I thinks it is attaching to ports 8005, 8009, 8080, 8443. If I run the startup.sh again I get errors that the ports are already in use, so I think that the script is working. I can't get (even after reboot and startup.sh again) the tomcat server to serve anything. It just times out on every call. Bad calls to bad ports return an error message at least, but nothing to any of the good ports returns anything. I can't even run the shutdown.sh script because Connection refused.
ubuntu@ip-172-31-18-231:~$ sudo /opt/apache-tomcat-8.0.43/bin/shutdown.sh
Using CATALINA_BASE: /opt/apache-tomcat-8.0.43
Using CATALINA_HOME: /opt/apache-tomcat-8.0.43
Using CATALINA_TMPDIR: /opt/apache-tomcat-8.0.43/temp
Using JRE_HOME: /usr
Using CLASSPATH: /opt/apache-tomcat-8.0.43/bin/bootstrap.jar:/opt/apache-tomcat-8.0.43/bin/tomcat-juli.jar
OpenJDK 64-Bit Server VM warning: ignoring option MaxPermSize=1024m; support was removed in 8.0
Sep 04, 2018 8:43:16 PM org.apache.catalina.startup.Catalina stopServer
SEVERE: Could not contact localhost:8005. Tomcat may not be running.
Sep 04, 2018 8:43:17 PM org.apache.catalina.startup.Catalina stopServer
SEVERE: Catalina.stop:
java.net.ConnectException: Connection refused (Connection refused)
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:589)
at java.net.Socket.connect(Socket.java:538)
at java.net.Socket.<init>(Socket.java:434)
at java.net.Socket.<init>(Socket.java:211)
at org.apache.catalina.startup.Catalina.stopServer(Catalina.java:450)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.catalina.startup.Bootstrap.stopServer(Bootstrap.java:400)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:487)
Using CATALINA_BASE: /opt/apache-tomcat-8.0.43
Using CATALINA_HOME: /opt/apache-tomcat-8.0.43
Using CATALINA_TMPDIR: /opt/apache-tomcat-8.0.43/temp
Using JRE_HOME: /usr
Using CLASSPATH: /opt/apache-tomcat-8.0.43/bin/bootstrap.jar:/opt/apache-tomcat-8.0.43/bin/tomcat-juli.jar
OpenJDK 64-Bit Server VM warning: ignoring option MaxPermSize=1024m; support was removed in 8.0
Sep 04, 2018 8:43:16 PM org.apache.catalina.startup.Catalina stopServer
SEVERE: Could not contact localhost:8005. Tomcat may not be running.
Sep 04, 2018 8:43:17 PM org.apache.catalina.startup.Catalina stopServer
SEVERE: Catalina.stop:
java.net.ConnectException: Connection refused (Connection refused)
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:589)
at java.net.Socket.connect(Socket.java:538)
at java.net.Socket.<init>(Socket.java:434)
at java.net.Socket.<init>(Socket.java:211)
at org.apache.catalina.startup.Catalina.stopServer(Catalina.java:450)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.catalina.startup.Bootstrap.stopServer(Bootstrap.java:400)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:487)
I tried to open the 8080 because I thought maybe something was wrong with my certificates, just to get the tomcat server to give me anything, but it still doesn't work. Here is my server.xml
ubuntu@ip-172-31-18-231:~$ sudo cat /opt/apache-tomcat-8.0.43/conf/server*
<?xml version='1.0' encoding='utf-8'?>
<!--
Licensed to the Apache Software Foundation (ASF) under one or more
contributor license agreements. See the NOTICE file distributed with
this work for additional information regarding copyright ownership.
The ASF licenses this file to You under the Apache License, Version 2.0
(the "License"); you may not use this file except in compliance with
the License. You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an "AS IS" BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.
-->
<!-- Note: A "Server" is not itself a "Container", so you may not
define subcomponents such as "Valves" at this level.
Documentation at /docs/config/server.html
-->
<Server port="8005" shutdown="SHUTDOWN">
<Listener className="org.apache.catalina.startup.VersionLoggerListener" />
<!-- Security listener. Documentation at /docs/config/listeners.html
<Listener className="org.apache.catalina.security.SecurityListener" />
-->
<!--APR library loader. Documentation at /docs/apr.html -->
<Listener className="org.apache.catalina.core.AprLifecycleListener" SSLEngine="on" />
<!-- Prevent memory leaks due to use of particular java/javax APIs-->
<Listener className="org.apache.catalina.core.JreMemoryLeakPreventionListener" />
<Listener className="org.apache.catalina.mbeans.GlobalResourcesLifecycleListener" />
<Listener className="org.apache.catalina.core.ThreadLocalLeakPreventionListener" />
<!-- Global JNDI resources
Documentation at /docs/jndi-resources-howto.html
-->
<GlobalNamingResources>
<!-- Editable user database that can also be used by
UserDatabaseRealm to authenticate users
-->
<Resource name="UserDatabase" auth="Container"
type="org.apache.catalina.UserDatabase"
description="User database that can be updated and saved"
factory="org.apache.catalina.users.MemoryUserDatabaseFactory"
pathname="conf/tomcat-users.xml" />
</GlobalNamingResources>
<!-- A "Service" is a collection of one or more "Connectors" that share
a single "Container" Note: A "Service" is not itself a "Container",
so you may not define subcomponents such as "Valves" at this level.
Documentation at /docs/config/service.html
-->
<Service name="Catalina">
<!--The connectors can use a shared executor, you can define one or more named thread pools-->
<!--
<Executor name="tomcatThreadPool" namePrefix="catalina-exec-"
maxThreads="150" minSpareThreads="4"/>
-->
<!-- A "Connector" represents an endpoint by which requests are received
and responses are returned. Documentation at :
Java HTTP Connector: /docs/config/http.html (blocking & non-blocking)
Java AJP Connector: /docs/config/ajp.html
APR (HTTP/AJP) Connector: /docs/apr.html
Define a non-SSL/TLS HTTP/1.1 Connector on port 8080
-->
<Connector port="8080" protocol="HTTP/1.1"
connectionTimeout="20000"
maxThreads="150"
secure="false"
/>
<!--
<Connector port="8080" protocol="HTTP/1.1"
connectionTimeout="20000"
redirectPort="8443" />
-->
<!-- Define a SSL Coyote HTTP/1.1 Connector on port 8443 -->
<Connector port="8443" protocol="HTTP/1.1" SSLEnabled="true"
maxThreads="150" scheme="https" secure="true"
clientAuth="false" sslProtocol="TLS"
keystoreFile="/opt/certificates/cpm.pfx"
keyAlias="1"
keystoreType="PKCS12"
keystorePass="XXXXXXXXX" />
<!-- A "Connector" using the shared thread pool-->
<!--
<Connector executor="tomcatThreadPool"
port="8080" protocol="HTTP/1.1"
connectionTimeout="20000"
redirectPort="8443" />
-->
<!-- Define a SSL/TLS HTTP/1.1 Connector on port 8443
This connector uses the NIO implementation that requires the JSSE
style configuration. When using the APR/native implementation, the
OpenSSL style configuration is required as described in the APR/native
documentation -->
<!--
<Connector port="8443" protocol="org.apache.coyote.http11.Http11NioProtocol"
maxThreads="150" SSLEnabled="true" scheme="https" secure="true"
clientAuth="false" sslProtocol="TLS" />
-->
<!-- Define an AJP 1.3 Connector on port 8009 -->
<Connector port="8009" protocol="AJP/1.3" redirectPort="8443" />
<!-- An Engine represents the entry point (within Catalina) that processes
every request. The Engine implementation for Tomcat stand alone
analyzes the HTTP headers included with the request, and passes them
on to the appropriate Host (virtual host).
Documentation at /docs/config/engine.html -->
<!-- You should set jvmRoute to support load-balancing via AJP ie :
<Engine name="Catalina" defaultHost="localhost" jvmRoute="jvm1">
-->
<Engine name="Catalina" defaultHost="localhost">
<!--For clustering, please take a look at documentation at:
/docs/cluster-howto.html (simple how to)
/docs/config/cluster.html (reference documentation) -->
<!--
<Cluster className="org.apache.catalina.ha.tcp.SimpleTcpCluster"/>
-->
<!-- Use the LockOutRealm to prevent attempts to guess user passwords
via a brute-force attack -->
<Realm className="org.apache.catalina.realm.LockOutRealm">
<!-- This Realm uses the UserDatabase configured in the global JNDI
resources under the key "UserDatabase". Any edits
that are performed against this UserDatabase are immediately
available for use by the Realm. -->
<Realm className="org.apache.catalina.realm.UserDatabaseRealm"
resourceName="UserDatabase"/>
</Realm>
<Host name="localhost" appBase="webapps"
unpackWARs="true" autoDeploy="true">
<!-- SingleSignOn valve, share authentication between web applications
Documentation at: /docs/config/valve.html -->
<!--
<Valve className="org.apache.catalina.authenticator.SingleSignOn" />
-->
<!-- Access log processes all example.
Documentation at: /docs/config/valve.html
Note: The pattern used is equivalent to using pattern="common" -->
<Valve className="org.apache.catalina.valves.AccessLogValve" directory="logs"
prefix="localhost_access_log" suffix=".txt"
pattern="%h %l %u %t "%r" %s %b" />
</Host>
</Engine>
</Service>
</Server>
<?xml version='1.0' encoding='utf-8'?>
<!--
Licensed to the Apache Software Foundation (ASF) under one or more
contributor license agreements. See the NOTICE file distributed with
this work for additional information regarding copyright ownership.
The ASF licenses this file to You under the Apache License, Version 2.0
(the "License"); you may not use this file except in compliance with
the License. You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an "AS IS" BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.
-->
<!-- Note: A "Server" is not itself a "Container", so you may not
define subcomponents such as "Valves" at this level.
Documentation at /docs/config/server.html
-->
<Server port="8005" shutdown="SHUTDOWN">
<Listener className="org.apache.catalina.startup.VersionLoggerListener" />
<!-- Security listener. Documentation at /docs/config/listeners.html
<Listener className="org.apache.catalina.security.SecurityListener" />
-->
<!--APR library loader. Documentation at /docs/apr.html -->
<Listener className="org.apache.catalina.core.AprLifecycleListener" SSLEngine="on" />
<!-- Prevent memory leaks due to use of particular java/javax APIs-->
<Listener className="org.apache.catalina.core.JreMemoryLeakPreventionListener" />
<Listener className="org.apache.catalina.mbeans.GlobalResourcesLifecycleListener" />
<Listener className="org.apache.catalina.core.ThreadLocalLeakPreventionListener" />
<!-- Global JNDI resources
Documentation at /docs/jndi-resources-howto.html
-->
<GlobalNamingResources>
<!-- Editable user database that can also be used by
UserDatabaseRealm to authenticate users
-->
<Resource name="UserDatabase" auth="Container"
type="org.apache.catalina.UserDatabase"
description="User database that can be updated and saved"
factory="org.apache.catalina.users.MemoryUserDatabaseFactory"
pathname="conf/tomcat-users.xml" />
</GlobalNamingResources>
<!-- A "Service" is a collection of one or more "Connectors" that share
a single "Container" Note: A "Service" is not itself a "Container",
so you may not define subcomponents such as "Valves" at this level.
Documentation at /docs/config/service.html
-->
<Service name="Catalina">
<!--The connectors can use a shared executor, you can define one or more named thread pools-->
<!--
<Executor name="tomcatThreadPool" namePrefix="catalina-exec-"
maxThreads="150" minSpareThreads="4"/>
-->
<!-- A "Connector" represents an endpoint by which requests are received
and responses are returned. Documentation at :
Java HTTP Connector: /docs/config/http.html (blocking & non-blocking)
Java AJP Connector: /docs/config/ajp.html
APR (HTTP/AJP) Connector: /docs/apr.html
Define a non-SSL/TLS HTTP/1.1 Connector on port 8080
-->
<Connector port="8080" protocol="HTTP/1.1"
connectionTimeout="20000"
maxThreads="150"
secure="false"
/>
<!--
<Connector port="8080" protocol="HTTP/1.1"
connectionTimeout="20000"
redirectPort="8443" />
-->
<!-- Define a SSL Coyote HTTP/1.1 Connector on port 8443 -->
<Connector port="8443" protocol="HTTP/1.1" SSLEnabled="true"
maxThreads="150" scheme="https" secure="true"
clientAuth="false" sslProtocol="TLS"
keystoreFile="/opt/certificates/cpm.pfx"
keyAlias="1"
keystoreType="PKCS12"
keystorePass="XXXXXXXXX" />
<!-- A "Connector" using the shared thread pool-->
<!--
<Connector executor="tomcatThreadPool"
port="8080" protocol="HTTP/1.1"
connectionTimeout="20000"
redirectPort="8443" />
-->
<!-- Define a SSL/TLS HTTP/1.1 Connector on port 8443
This connector uses the NIO implementation that requires the JSSE
style configuration. When using the APR/native implementation, the
OpenSSL style configuration is required as described in the APR/native
documentation -->
<!--
<Connector port="8443" protocol="org.apache.coyote.http11.Http11NioProtocol"
maxThreads="150" SSLEnabled="true" scheme="https" secure="true"
clientAuth="false" sslProtocol="TLS" />
-->
<!-- Define an AJP 1.3 Connector on port 8009 -->
<Connector port="8009" protocol="AJP/1.3" redirectPort="8443" />
<!-- An Engine represents the entry point (within Catalina) that processes
every request. The Engine implementation for Tomcat stand alone
analyzes the HTTP headers included with the request, and passes them
on to the appropriate Host (virtual host).
Documentation at /docs/config/engine.html -->
<!-- You should set jvmRoute to support load-balancing via AJP ie :
<Engine name="Catalina" defaultHost="localhost" jvmRoute="jvm1">
-->
<Engine name="Catalina" defaultHost="localhost">
<!--For clustering, please take a look at documentation at:
/docs/cluster-howto.html (simple how to)
/docs/config/cluster.html (reference documentation) -->
<!--
<Cluster className="org.apache.catalina.ha.tcp.SimpleTcpCluster"/>
-->
<!-- Use the LockOutRealm to prevent attempts to guess user passwords
via a brute-force attack -->
<Realm className="org.apache.catalina.realm.LockOutRealm">
<!-- This Realm uses the UserDatabase configured in the global JNDI
resources under the key "UserDatabase". Any edits
that are performed against this UserDatabase are immediately
available for use by the Realm. -->
<Realm className="org.apache.catalina.realm.UserDatabaseRealm"
resourceName="UserDatabase"/>
</Realm>
<Host name="localhost" appBase="webapps"
unpackWARs="true" autoDeploy="true">
<!-- SingleSignOn valve, share authentication between web applications
Documentation at: /docs/config/valve.html -->
<!--
<Valve className="org.apache.catalina.authenticator.SingleSignOn" />
-->
<!-- Access log processes all example.
Documentation at: /docs/config/valve.html
Note: The pattern used is equivalent to using pattern="common" -->
<Valve className="org.apache.catalina.valves.AccessLogValve" directory="logs"
prefix="localhost_access_log" suffix=".txt"
pattern="%h %l %u %t "%r" %s %b" />
</Host>
</Engine>
</Service>
</Server>
Any suggestions on what to try next?
Thanks in advance,
Peter
petera...@gmail.com
Sep 4, 2018, 5:53:26 PM9/4/18
to Edge Test Tool (ETT)
For the AWS security group I have
Type | Protocol | Port Range | Source | Description |
|---|---|---|---|---|
Custom TCP Rule | TCP | 8080 | Tomcat CCDA-Valida... | |
Custom TCP Rule | TCP | 8080 | ::/0 | Tomcat CCDA-Valida... |
POP3 | TCP | 110 | ||
POP3 | TCP | 110 | ::/0 | |
SSH | TCP | 22 | ||
SMTP | TCP | 25 | ||
SMTP | TCP | 25 | ::/0 | |
Custom TCP Rule | TCP | 8443 | Tomcat SSL | |
Custom TCP Rule | TCP | 8443 | ::/0 | Tomcat SSL |
IMAP | TCP | 143 | ||
IMAP | TCP | 143 | ::/0 | |
Custom TCP Rule | TCP | 8005 | Tomat shutdown | |
Custom TCP Rule | TCP | 8005 | ::/0 | Tomat shutdown |
Custom TCP Rule | TCP | 12080 | Tomcat from other ... | |
Custom TCP Rule | TCP | 12080 | ::/0 | Tomcat from other ... |
petera...@gmail.com
Sep 4, 2018, 6:01:31 PM9/4/18
to Edge Test Tool (ETT)
Catalina.out
04-Sep-2018 19:11:02.775 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server number: 8.0.43.0
04-Sep-2018 19:11:02.775 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Name: Linux
04-Sep-2018 19:11:02.775 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Version: 3.13.0-116-generic
04-Sep-2018 19:11:02.775 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Architecture: amd64
04-Sep-2018 19:11:02.775 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Java Home: /usr/lib/jvm/java-8-openjdk-amd64/jre
04-Sep-2018 19:11:02.776 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Version: 1.8.0_111-8u111-b14-3~14.04.1-b14
04-Sep-2018 19:11:02.776 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Vendor: Oracle Corporation
04-Sep-2018 19:11:02.776 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_BASE: /opt/apache-tomcat-8.0.43
04-Sep-2018 19:11:02.776 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_HOME: /opt/apache-tomcat-8.0.43
04-Sep-2018 19:11:02.776 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.config.file=/opt/apache-tomcat-8.0.43/conf/logging.properties
04-Sep-2018 19:11:02.777 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager
04-Sep-2018 19:11:02.778 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Xmx4096m
04-Sep-2018 19:11:02.778 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -XX:MaxPermSize=1024m
04-Sep-2018 19:11:02.778 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djdk.tls.ephemeralDHKeySize=2048
04-Sep-2018 19:11:02.779 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.protocol.handler.pkgs=org.apache.catalina.webresources
04-Sep-2018 19:11:02.779 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.endorsed.dirs=/opt/apache-tomcat-8.0.43/endorsed
04-Sep-2018 19:11:02.785 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.base=/opt/apache-tomcat-8.0.43
04-Sep-2018 19:11:02.785 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.home=/opt/apache-tomcat-8.0.43
04-Sep-2018 19:11:02.786 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.io.tmpdir=/opt/apache-tomcat-8.0.43/temp
04-Sep-2018 19:11:02.786 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/java/packages/lib/amd64:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib
04-Sep-2018 19:11:03.002 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8080"]
04-Sep-2018 19:11:03.037 INFO [main] org.apache.tomcat.util.net.NioSelectorPool.getSharedSelector Using a shared selector for servlet write/read
04-Sep-2018 19:11:03.045 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8443"]
04-Sep-2018 19:11:03.295 INFO [main] org.apache.tomcat.util.net.NioSelectorPool.getSharedSelector Using a shared selector for servlet write/read
04-Sep-2018 19:11:03.301 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["ajp-nio-8009"]
04-Sep-2018 19:11:03.302 INFO [main] org.apache.tomcat.util.net.NioSelectorPool.getSharedSelector Using a shared selector for servlet write/read
04-Sep-2018 19:11:03.304 INFO [main] org.apache.catalina.startup.Catalina.load Initialization processed in 1351 ms
04-Sep-2018 19:11:03.346 INFO [main] org.apache.catalina.core.StandardService.startInternal Starting service Catalina
04-Sep-2018 19:11:03.348 INFO [main] org.apache.catalina.core.StandardEngine.startInternal Starting Servlet Engine: Apache Tomcat/8.0.43
04-Sep-2018 19:11:03.371 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDescriptor Deploying configuration descriptor /opt/apache-tomcat-8.0.43/conf/Catalina/localhost/referenceccdaservice.xml
04-Sep-2018 19:11:13.497 INFO [localhost-startStop-1] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time.
04-Sep-2018 19:11:02.773 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version: Apache Tomcat/8.0.43
04-Sep-2018 19:11:02.775 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server built: Mar 28 2017 14:42:59 UTC04-Sep-2018 19:11:02.775 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server number: 8.0.43.0
04-Sep-2018 19:11:02.775 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Name: Linux
04-Sep-2018 19:11:02.775 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Version: 3.13.0-116-generic
04-Sep-2018 19:11:02.775 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Architecture: amd64
04-Sep-2018 19:11:02.775 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Java Home: /usr/lib/jvm/java-8-openjdk-amd64/jre
04-Sep-2018 19:11:02.776 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Version: 1.8.0_111-8u111-b14-3~14.04.1-b14
04-Sep-2018 19:11:02.776 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Vendor: Oracle Corporation
04-Sep-2018 19:11:02.776 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_BASE: /opt/apache-tomcat-8.0.43
04-Sep-2018 19:11:02.776 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_HOME: /opt/apache-tomcat-8.0.43
04-Sep-2018 19:11:02.776 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.config.file=/opt/apache-tomcat-8.0.43/conf/logging.properties
04-Sep-2018 19:11:02.777 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager
04-Sep-2018 19:11:02.778 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Xmx4096m
04-Sep-2018 19:11:02.778 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -XX:MaxPermSize=1024m
04-Sep-2018 19:11:02.778 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djdk.tls.ephemeralDHKeySize=2048
04-Sep-2018 19:11:02.779 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.protocol.handler.pkgs=org.apache.catalina.webresources
04-Sep-2018 19:11:02.779 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.endorsed.dirs=/opt/apache-tomcat-8.0.43/endorsed
04-Sep-2018 19:11:02.785 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.base=/opt/apache-tomcat-8.0.43
04-Sep-2018 19:11:02.785 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.home=/opt/apache-tomcat-8.0.43
04-Sep-2018 19:11:02.786 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.io.tmpdir=/opt/apache-tomcat-8.0.43/temp
04-Sep-2018 19:11:02.786 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /usr/java/packages/lib/amd64:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib
04-Sep-2018 19:11:03.002 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8080"]
04-Sep-2018 19:11:03.037 INFO [main] org.apache.tomcat.util.net.NioSelectorPool.getSharedSelector Using a shared selector for servlet write/read
04-Sep-2018 19:11:03.045 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8443"]
04-Sep-2018 19:11:03.295 INFO [main] org.apache.tomcat.util.net.NioSelectorPool.getSharedSelector Using a shared selector for servlet write/read
04-Sep-2018 19:11:03.301 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["ajp-nio-8009"]
04-Sep-2018 19:11:03.302 INFO [main] org.apache.tomcat.util.net.NioSelectorPool.getSharedSelector Using a shared selector for servlet write/read
04-Sep-2018 19:11:03.304 INFO [main] org.apache.catalina.startup.Catalina.load Initialization processed in 1351 ms
04-Sep-2018 19:11:03.346 INFO [main] org.apache.catalina.core.StandardService.startInternal Starting service Catalina
04-Sep-2018 19:11:03.348 INFO [main] org.apache.catalina.core.StandardEngine.startInternal Starting Servlet Engine: Apache Tomcat/8.0.43
04-Sep-2018 19:11:03.371 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDescriptor Deploying configuration descriptor /opt/apache-tomcat-8.0.43/conf/Catalina/localhost/referenceccdaservice.xml
04-Sep-2018 19:11:13.497 INFO [localhost-startStop-1] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time.
petera...@gmail.com
Sep 4, 2018, 6:05:54 PM9/4/18
to Edge Test Tool (ETT)
.... Skip a bit .... Finally ends with this:
19:11:29,960 INFO [CCDAPatient:24] City = Beaverton
19:11:29,960 INFO [CCDAPatient:25] State = OR
19:11:29,960 INFO [CCDAPatient:26] Postal Code = 97266
19:11:29,960 INFO [CCDAPatient:27] Country = US
19:11:29,960 INFO [CCDAPatient:28] Postal Address Use = null
19:11:29,961 INFO [CCDAParticipant:24] Telecom = tel:+1(555)-555-1002
19:11:30,145 INFO [EmbeddedDatabaseFactory:185] Starting embedded database: url='jdbc:hsqldb:mem:testdb', username='sa'
19:11:30,664 INFO [ScriptUtils:443] Executing SQL script from class path resource [schema.sql]
19:11:30,679 INFO [ScriptUtils:502] Executed SQL script from class path resource [schema.sql] in 15 ms.
19:11:30,708 INFO [LocalContainerEntityManagerFactoryBean:339] Building JPA container EntityManagerFactory for persistence unit 'default'
19:11:30,739 INFO [LogHelper:31] HHH000204: Processing PersistenceUnitInfo [
name: default
...]
19:11:30,939 INFO [Version:37] HHH000412: Hibernate Core {5.0.7.Final}
19:11:30,946 INFO [Environment:213] HHH000206: hibernate.properties not found
19:11:30,949 INFO [Environment:317] HHH000021: Bytecode provider name : javassist
19:11:31,049 INFO [Version:66] HCANN000001: Hibernate Commons Annotations {5.0.1.Final}
19:11:31,448 INFO [Dialect:156] HHH000400: Using dialect: org.hibernate.dialect.HSQLDialect
19:11:31,826 WARN [SessionFactoryBuilderImpl:648] Unrecognized hbm2ddl_auto value : none. Supported values include create, create-drop, update, and validate. Ignoring
19:11:32,791 INFO [QueryTranslatorFactoryInitiator:47] HHH000397: Using ASTQueryTranslatorFactory
19:11:34,546 INFO [RequestMappingHandlerMapping:527] Mapped "{[/getvaluesetsbyoids],methods=[GET]}" onto public java.util.List<org.sitenv.vocabularies.validation.entities.VsacValueSet> org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.getValuesetsByOids(java.lang.String[])
19:11:34,547 INFO [RequestMappingHandlerMapping:527] Mapped "{[/getbycodeincodesystem],methods=[GET]}" onto public java.util.List<org.sitenv.vocabularies.validation.entities.Code> org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.getByCodeInCodeSystems(java.lang.String,java.lang.String[])
19:11:34,547 INFO [RequestMappingHandlerMapping:527] Mapped "{[/getbycodeinvaluesetoid],methods=[GET]}" onto public java.util.List<org.sitenv.vocabularies.validation.entities.VsacValueSet> org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.getByCodeInValuesetOid(java.lang.String,java.lang.String[])
19:11:34,547 INFO [RequestMappingHandlerMapping:527] Mapped "{[/iscodeandisplaynameincodesystem],methods=[GET]}" onto public boolean org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.isCodeAndDisplayNameFoundInCodeSystems(java.lang.String,java.lang.String,java.lang.String[])
19:11:34,547 INFO [RequestMappingHandlerMapping:527] Mapped "{[/iscodeincodesystem],methods=[GET]}" onto public boolean org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.isCodeFoundInCodeSystems(java.lang.String,java.lang.String[])
19:11:34,548 INFO [RequestMappingHandlerMapping:527] Mapped "{[/iscodeinvalueset],methods=[GET]}" onto public boolean org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.isCodeFoundInValuesetOids(java.lang.String,java.lang.String[])
19:11:34,548 INFO [RequestMappingHandlerMapping:527] Mapped "{[/senderreceivervalidationobjectivesandreferencefiles],methods=[GET]}" onto public java.util.Map<java.lang.String, java.util.Map<java.lang.String, java.util.List<java.lang.String>>> org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.getMapOfSenderAndRecieverValidationObjectivesWithReferenceFiles()
19:11:34,548 INFO [RequestMappingHandlerMapping:527] Mapped "{[/],methods=[POST],consumes=[multipart/*]}" onto public org.sitenv.referenceccda.dto.ValidationResultsDto org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.doValidation(java.lang.String,java.lang.String,org.springframework.web.multipart.MultipartFile)
19:11:34,556 INFO [RequestMappingHandlerMapping:527] Mapped "{[/v2/api-docs],methods=[GET],produces=[application/json || application/hal+json]}" onto public org.springframework.http.ResponseEntity<springfox.documentation.spring.web.json.Json> springfox.documentation.swagger2.web.Swagger2Controller.getDocumentation(java.lang.String,javax.servlet.http.HttpServletRequest)
19:11:34,563 INFO [RequestMappingHandlerMapping:527] Mapped "{[/swagger-resources/configuration/security]}" onto org.springframework.http.ResponseEntity<springfox.documentation.swagger.web.SecurityConfiguration> springfox.documentation.swagger.web.ApiResourceController.securityConfiguration()
19:11:34,564 INFO [RequestMappingHandlerMapping:527] Mapped "{[/swagger-resources/configuration/ui]}" onto org.springframework.http.ResponseEntity<springfox.documentation.swagger.web.UiConfiguration> springfox.documentation.swagger.web.ApiResourceController.uiConfiguration()
19:11:34,567 INFO [RequestMappingHandlerMapping:527] Mapped "{[/swagger-resources]}" onto org.springframework.http.ResponseEntity<java.util.List<springfox.documentation.swagger.web.SwaggerResource>> springfox.documentation.swagger.web.ApiResourceController.swaggerResources()
19:11:34,896 INFO [SimpleUrlHandlerMapping:341] Mapped URL path [/ui] onto handler of type [class org.springframework.web.servlet.mvc.ParameterizableViewController]
19:11:34,922 INFO [SimpleUrlHandlerMapping:341] Mapped URL path [/resources/**] onto handler of type [class org.springframework.web.servlet.resource.ResourceHttpRequestHandler]
19:11:34,922 INFO [SimpleUrlHandlerMapping:341] Mapped URL path [/swagger-ui.html] onto handler of type [class org.springframework.web.servlet.resource.ResourceHttpRequestHandler]
19:11:34,922 INFO [SimpleUrlHandlerMapping:341] Mapped URL path [/webjars/**] onto handler of type [class org.springframework.web.servlet.resource.ResourceHttpRequestHandler]
19:11:34,922 INFO [SimpleUrlHandlerMapping:341] Mapped URL path [/static/**] onto handler of type [class org.springframework.web.servlet.resource.ResourceHttpRequestHandler]
19:11:35,009 INFO [RequestMappingHandlerAdapter:532] Looking for @ControllerAdvice: Root WebApplicationContext: startup date [Tue Sep 04 19:11:14 UTC 2018]; root of context hierarchy
LOADING VOCABULARY DATABASES FROM THE FOLLOWING RESOURCES: VALUESETS - /opt/apache-tomcat-8.0.43/mdht/Environment/VocabularyConfiguration/Vocabulary/valueset_repository CODES - /opt/apache-tomcat-8.0.43/mdht/Environment/VocabularyConfiguration/Vocabulary/code_repository
19:11:35,139 INFO [VocabularyLoadRunner:92] Loading vocabularies at: /opt/apache-tomcat-8.0.43/mdht/Environment/VocabularyConfiguration/Vocabulary/code_repository...
19:11:35,145 INFO [VocabularyLoadRunner:44] Loading files in : ICD9CM_DX...
19:11:36,512 INFO [VocabularyLoadRunner:44] Loading files in : ICD9CM_SG...
19:11:36,949 INFO [VocabularyLoadRunner:44] Loading files in : CPT...
19:11:38,327 INFO [VocabularyLoadRunner:44] Loading files in : ICD10PCS...
19:11:41,728 INFO [VocabularyLoadRunner:44] Loading files in : ICD10CM...
19:11:45,908 INFO [VocabularyLoadRunner:44] Loading files in : CDT...
19:11:47,439 INFO [VocabularyLoadRunner:44] Loading files in : RXNORM...
19:16:08,952 INFO [VocabularyLoadRunner:44] Loading files in : SNOMED-CT...
19:11:29,960 INFO [CCDAPatient:25] State = OR
19:11:29,960 INFO [CCDAPatient:26] Postal Code = 97266
19:11:29,960 INFO [CCDAPatient:27] Country = US
19:11:29,960 INFO [CCDAPatient:28] Postal Address Use = null
19:11:29,961 INFO [CCDAParticipant:24] Telecom = tel:+1(555)-555-1002
19:11:30,145 INFO [EmbeddedDatabaseFactory:185] Starting embedded database: url='jdbc:hsqldb:mem:testdb', username='sa'
19:11:30,664 INFO [ScriptUtils:443] Executing SQL script from class path resource [schema.sql]
19:11:30,679 INFO [ScriptUtils:502] Executed SQL script from class path resource [schema.sql] in 15 ms.
19:11:30,708 INFO [LocalContainerEntityManagerFactoryBean:339] Building JPA container EntityManagerFactory for persistence unit 'default'
19:11:30,739 INFO [LogHelper:31] HHH000204: Processing PersistenceUnitInfo [
name: default
...]
19:11:30,939 INFO [Version:37] HHH000412: Hibernate Core {5.0.7.Final}
19:11:30,946 INFO [Environment:213] HHH000206: hibernate.properties not found
19:11:30,949 INFO [Environment:317] HHH000021: Bytecode provider name : javassist
19:11:31,049 INFO [Version:66] HCANN000001: Hibernate Commons Annotations {5.0.1.Final}
19:11:31,448 INFO [Dialect:156] HHH000400: Using dialect: org.hibernate.dialect.HSQLDialect
19:11:31,826 WARN [SessionFactoryBuilderImpl:648] Unrecognized hbm2ddl_auto value : none. Supported values include create, create-drop, update, and validate. Ignoring
19:11:32,791 INFO [QueryTranslatorFactoryInitiator:47] HHH000397: Using ASTQueryTranslatorFactory
19:11:34,546 INFO [RequestMappingHandlerMapping:527] Mapped "{[/getvaluesetsbyoids],methods=[GET]}" onto public java.util.List<org.sitenv.vocabularies.validation.entities.VsacValueSet> org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.getValuesetsByOids(java.lang.String[])
19:11:34,547 INFO [RequestMappingHandlerMapping:527] Mapped "{[/getbycodeincodesystem],methods=[GET]}" onto public java.util.List<org.sitenv.vocabularies.validation.entities.Code> org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.getByCodeInCodeSystems(java.lang.String,java.lang.String[])
19:11:34,547 INFO [RequestMappingHandlerMapping:527] Mapped "{[/getbycodeinvaluesetoid],methods=[GET]}" onto public java.util.List<org.sitenv.vocabularies.validation.entities.VsacValueSet> org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.getByCodeInValuesetOid(java.lang.String,java.lang.String[])
19:11:34,547 INFO [RequestMappingHandlerMapping:527] Mapped "{[/iscodeandisplaynameincodesystem],methods=[GET]}" onto public boolean org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.isCodeAndDisplayNameFoundInCodeSystems(java.lang.String,java.lang.String,java.lang.String[])
19:11:34,547 INFO [RequestMappingHandlerMapping:527] Mapped "{[/iscodeincodesystem],methods=[GET]}" onto public boolean org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.isCodeFoundInCodeSystems(java.lang.String,java.lang.String[])
19:11:34,548 INFO [RequestMappingHandlerMapping:527] Mapped "{[/iscodeinvalueset],methods=[GET]}" onto public boolean org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.isCodeFoundInValuesetOids(java.lang.String,java.lang.String[])
19:11:34,548 INFO [RequestMappingHandlerMapping:527] Mapped "{[/senderreceivervalidationobjectivesandreferencefiles],methods=[GET]}" onto public java.util.Map<java.lang.String, java.util.Map<java.lang.String, java.util.List<java.lang.String>>> org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.getMapOfSenderAndRecieverValidationObjectivesWithReferenceFiles()
19:11:34,548 INFO [RequestMappingHandlerMapping:527] Mapped "{[/],methods=[POST],consumes=[multipart/*]}" onto public org.sitenv.referenceccda.dto.ValidationResultsDto org.sitenv.referenceccda.controllers.ReferenceCCDAValidationController.doValidation(java.lang.String,java.lang.String,org.springframework.web.multipart.MultipartFile)
19:11:34,556 INFO [RequestMappingHandlerMapping:527] Mapped "{[/v2/api-docs],methods=[GET],produces=[application/json || application/hal+json]}" onto public org.springframework.http.ResponseEntity<springfox.documentation.spring.web.json.Json> springfox.documentation.swagger2.web.Swagger2Controller.getDocumentation(java.lang.String,javax.servlet.http.HttpServletRequest)
19:11:34,563 INFO [RequestMappingHandlerMapping:527] Mapped "{[/swagger-resources/configuration/security]}" onto org.springframework.http.ResponseEntity<springfox.documentation.swagger.web.SecurityConfiguration> springfox.documentation.swagger.web.ApiResourceController.securityConfiguration()
19:11:34,564 INFO [RequestMappingHandlerMapping:527] Mapped "{[/swagger-resources/configuration/ui]}" onto org.springframework.http.ResponseEntity<springfox.documentation.swagger.web.UiConfiguration> springfox.documentation.swagger.web.ApiResourceController.uiConfiguration()
19:11:34,567 INFO [RequestMappingHandlerMapping:527] Mapped "{[/swagger-resources]}" onto org.springframework.http.ResponseEntity<java.util.List<springfox.documentation.swagger.web.SwaggerResource>> springfox.documentation.swagger.web.ApiResourceController.swaggerResources()
19:11:34,896 INFO [SimpleUrlHandlerMapping:341] Mapped URL path [/ui] onto handler of type [class org.springframework.web.servlet.mvc.ParameterizableViewController]
19:11:34,922 INFO [SimpleUrlHandlerMapping:341] Mapped URL path [/resources/**] onto handler of type [class org.springframework.web.servlet.resource.ResourceHttpRequestHandler]
19:11:34,922 INFO [SimpleUrlHandlerMapping:341] Mapped URL path [/swagger-ui.html] onto handler of type [class org.springframework.web.servlet.resource.ResourceHttpRequestHandler]
19:11:34,922 INFO [SimpleUrlHandlerMapping:341] Mapped URL path [/webjars/**] onto handler of type [class org.springframework.web.servlet.resource.ResourceHttpRequestHandler]
19:11:34,922 INFO [SimpleUrlHandlerMapping:341] Mapped URL path [/static/**] onto handler of type [class org.springframework.web.servlet.resource.ResourceHttpRequestHandler]
19:11:35,009 INFO [RequestMappingHandlerAdapter:532] Looking for @ControllerAdvice: Root WebApplicationContext: startup date [Tue Sep 04 19:11:14 UTC 2018]; root of context hierarchy
LOADING VOCABULARY DATABASES FROM THE FOLLOWING RESOURCES: VALUESETS - /opt/apache-tomcat-8.0.43/mdht/Environment/VocabularyConfiguration/Vocabulary/valueset_repository CODES - /opt/apache-tomcat-8.0.43/mdht/Environment/VocabularyConfiguration/Vocabulary/code_repository
19:11:35,139 INFO [VocabularyLoadRunner:92] Loading vocabularies at: /opt/apache-tomcat-8.0.43/mdht/Environment/VocabularyConfiguration/Vocabulary/code_repository...
19:11:35,145 INFO [VocabularyLoadRunner:44] Loading files in : ICD9CM_DX...
19:11:36,512 INFO [VocabularyLoadRunner:44] Loading files in : ICD9CM_SG...
19:11:36,949 INFO [VocabularyLoadRunner:44] Loading files in : CPT...
19:11:38,327 INFO [VocabularyLoadRunner:44] Loading files in : ICD10PCS...
19:11:41,728 INFO [VocabularyLoadRunner:44] Loading files in : ICD10CM...
19:11:45,908 INFO [VocabularyLoadRunner:44] Loading files in : CDT...
19:11:47,439 INFO [VocabularyLoadRunner:44] Loading files in : RXNORM...
19:16:08,952 INFO [VocabularyLoadRunner:44] Loading files in : SNOMED-CT...
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