ExploreDTI

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Alexander Leemans

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sutton.b...@gmail.com

5/22/18

NaN?? in output .txt file from atlas CSD analysis & additional residual questions

(1) In my connectivity matrices output (attached in excel & .txt versions), I get a fair number

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NaN?? in output .txt file from atlas CSD analysis & additional residual questions

(1) In my connectivity matrices output (attached in excel & .txt versions), I get a fair number

5/22/18

2/6/18

Visualizing pre-reconstructed ODF with ExploreDTI

Hello, I am interested in using ExploreDTI to visualize ODFs generated with different reconstruction

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Visualizing pre-reconstructed ODF with ExploreDTI

Hello, I am interested in using ExploreDTI to visualize ODFs generated with different reconstruction

2/6/18

Joost, Alberto De Luca3

3/15/18

Deterministic or probabilistic tractography in ExploreDTI?

Dear Joost, you are correct, the tractography in ExploreDTI is deterministic, so it is not directly

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Deterministic or probabilistic tractography in ExploreDTI?

Dear Joost, you are correct, the tractography in ExploreDTI is deterministic, so it is not directly

3/15/18

John Thompson, stijn m2

8/17/17

Help on running CSD tracking

Dear John, Could you elaborate on the acquisition parameters for the DWI sequence? One option might

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Help on running CSD tracking

Dear John, Could you elaborate on the acquisition parameters for the DWI sequence? One option might

8/17/17

ds...@bnac.net, … Sjoerd Vos5

4/6/17

Error while performing CSD tractography

Hi Dhaval, I think this isn't so much an error as just a long list of warnings within the CSD

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Error while performing CSD tractography

Hi Dhaval, I think this isn't so much an error as just a long list of warnings within the CSD

4/6/17

2/3/17

changing Lmax for CSD tractography

I just received the answer to my question: I need to change the name of the '_CSD_FOD.nii'

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changing Lmax for CSD tractography

I just received the answer to my question: I need to change the name of the '_CSD_FOD.nii'

2/3/17

Muen Hsu, … Alexander Leemans10

10/22/15

how to perform whole brain tractography (CSD) by command line

Perhaps, in the GUI version, the "wrong" FOD threshold setting was used... You should

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how to perform whole brain tractography (CSD) by command line

Perhaps, in the GUI version, the "wrong" FOD threshold setting was used... You should

10/22/15

Rui Lavrador, … Sjoerd Vos7

2/13/16

Spherical deconvolution for data with multiple b-values

Hi, I agree with Behzad: using the 75 DWIs @ b=2800 should yield very good results with CSD

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Spherical deconvolution for data with multiple b-values

Hi, I agree with Behzad: using the 75 DWIs @ b=2800 should yield very good results with CSD

2/13/16

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