ExploreDTI

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Welcome to the Q&A forum for ExploreDTI (www.ExploreDTI.com)!
I hope you'll find what you're looking for in this Google Group...

Alexander Leemans

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May 24

Hello, does anyone know how to use this toolbox to calculate HA and E2A？你好，有谁知道如何使用这个工具箱来计算HA和E2A

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Hello, does anyone know how to use this toolbox to calculate HA and E2A？你好，有谁知道如何使用这个工具箱来计算HA和E2A

May 24

May 12

Tractography Parameters

Dear Prof. Leemans or anyone who read my question, I am working on DTI data of children with age less

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Tractography Parameters

Dear Prof. Leemans or anyone who read my question, I am working on DTI data of children with age less

May 12

Omri Kimchi Feldhorn

Apr 24

Atlas offset Q&A

Hello everyone I'm trying to get FA and Number of Tracts info. sadly, when i try to run our

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Atlas offset Q&A

Hello everyone I'm trying to get FA and Number of Tracts info. sadly, when i try to run our

Apr 24

Apr 24

B matrix rotation

Hi, I wanted to ask if there is a way to rotate the B-matrix and then extract this rotated matrix

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B matrix rotation

Hi, I wanted to ask if there is a way to rotate the B-matrix and then extract this rotated matrix

Apr 24

Apr 24

Whole Brain Tractography

Hi, I would appreciate a detailed explanation of some of the parameters we define in the '

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Whole Brain Tractography

Hi, I would appreciate a detailed explanation of some of the parameters we define in the '

Apr 24

Apr 20

How to use b_matrix.mat to calculate diffusion tensor？

Do you know any way to change the order of my Bmatrix to [Bxx Bxy Bxz Byy Byz Bzz]? Or could you help

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How to use b_matrix.mat to calculate diffusion tensor？

Do you know any way to change the order of my Bmatrix to [Bxx Bxy Bxz Byy Byz Bzz]? Or could you help

Apr 20

Apr 5

NODDI eddy current/motion correction problem

Hello everyone, I am processing my NODDI data through Explore DTI , but there seems to be an issue

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NODDI eddy current/motion correction problem

Hello everyone, I am processing my NODDI data through Explore DTI , but there seems to be an issue

Apr 5

Mar 19

Can you download JUST the axial slices from DTI?

I was wondering if there was a method on the DTI out of which one could download just the axial

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Can you download JUST the axial slices from DTI?

I was wondering if there was a method on the DTI out of which one could download just the axial

Mar 19

Feb 2

Determining how many streamlines are seeded in whole brain tractography

Hello - I am wondering how I can determine how many streamlines were seeded (per voxel) in my whole

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Determining how many streamlines are seeded in whole brain tractography

Hello - I am wondering how I can determine how many streamlines were seeded (per voxel) in my whole

Feb 2

Jan 17

Different results on different computers_network analysis

Hi all, Is there any specific technical reason why the network analysis would yield different results

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Different results on different computers_network analysis

Hi all, Is there any specific technical reason why the network analysis would yield different results

Jan 17

Venkateswaran Rajagopalan

Jan 16

Registration Process in Network Analysis plugin

Dear All I searched through extensively in the forum to find an answer regarding how registration is

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Registration Process in Network Analysis plugin

Dear All I searched through extensively in the forum to find an answer regarding how registration is

Jan 16

longs...@gmail.com2

Jan 9

Creating individual space atlas for fMRI data using ExploreDTI.

I also might found a "bug" when using a customized atals for the connectome analysis. If

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Creating individual space atlas for fMRI data using ExploreDTI.

I also might found a "bug" when using a customized atals for the connectome analysis. If

Jan 9

leilan...@gmail.com2

12/13/22

Export motion distortion corrected files from MAT to NIFTI

another question I had is: when converting a tractography MAT file to TRK, is the TRK file in RAS

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Export motion distortion corrected files from MAT to NIFTI

another question I had is: when converting a tractography MAT file to TRK, is the TRK file in RAS

12/13/22

Alexander Leemans

11/22/22

Next ExploreDTI workshop

We're holding another ExploreDTI workshop! Where: Bergen, Norway When: 26-28 June, 2023 Details:

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Next ExploreDTI workshop

We're holding another ExploreDTI workshop! Where: Bergen, Norway When: 26-28 June, 2023 Details:

11/22/22

11/22/22

Hello everyone, After following the manual I managed to create an EPI/EC corrected version but there

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Hello everyone, After following the manual I managed to create an EPI/EC corrected version but there

11/22/22

11/10/22

Hi! I have a problem with ExploreDTI program running. After the installation, I used the program 2-3

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Hi! I have a problem with ExploreDTI program running. After the installation, I used the program 2-3

11/10/22

11/6/22

converting 3d nii to 4d

Hi, I am trying to convert my nii files from 3d to 4d. When I am choosing 'single data set

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converting 3d nii to 4d

Hi, I am trying to convert my nii files from 3d to 4d. When I am choosing 'single data set

11/6/22

10/6/22

Hello, I am trying to run the MainExporeDTI.p file, but everytime an error returns "Unrecognized

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Hello, I am trying to run the MainExporeDTI.p file, but everytime an error returns "Unrecognized

10/6/22

9/24/22

twisted network analyis regestration

I'm trying to use ExploreDTI to get connectivity matrix from atlas template/labels, The CSD

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twisted network analyis regestration

I'm trying to use ExploreDTI to get connectivity matrix from atlas template/labels, The CSD

9/24/22

Angela Bernabeu Sanz

8/30/22

About exporting data

Dear experts, I want to segment several white matter tracts and get the data for statistics. In this

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About exporting data

Dear experts, I want to segment several white matter tracts and get the data for statistics. In this

8/30/22

8/8/22

CSD tractography error with multi-shell data

Hello ExploreDTI I'm trying to analyze a multi shell DTI dataset with the following parameters

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CSD tractography error with multi-shell data

Hello ExploreDTI I'm trying to analyze a multi shell DTI dataset with the following parameters

8/8/22

Demi van den Ende

7/27/22

error EPI correction: the data should be in 3D

Dear experts, I want to perform the EPI correction on my data. I took all the steps described in the

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error EPI correction: the data should be in 3D

Dear experts, I want to perform the EPI correction on my data. I took all the steps described in the

7/27/22

Erick Hernández Gutiérrez

7/21/22

multi-tensor visualization.

Dear experts, I'm working with multi-tensor images and I would like to ask if ExploreDTI is

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multi-tensor visualization.

Dear experts, I'm working with multi-tensor images and I would like to ask if ExploreDTI is

7/21/22

Eleonora Picerni

7/21/22

multishell bval

Dear experts, I'm processing some raw data from a public dataset. I have a multishell bval (the

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multishell bval

Dear experts, I'm processing some raw data from a public dataset. I have a multishell bval (the

7/21/22

Jianzhong He, … Yuan3

7/20/22

Hi! The scripts are extremely helpful! But I wonder that in README it says "Note that several

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Hi! The scripts are extremely helpful! But I wonder that in README it says "Note that several

7/20/22

Eleonora Picerni

7/19/22

Dear experts, In converting some raw data into dti.mat. When checking for parameters settings (after

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Dear experts, In converting some raw data into dti.mat. When checking for parameters settings (after

7/19/22

Eleonora Picerni, Hami Mahdavinataj2

7/15/22

calculating dti.mat in standalone version of explore DTI

Hi, We had the same issue with standalone version in Windows 11. We have used the P-code version

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calculating dti.mat in standalone version of explore DTI

Hi, We had the same issue with standalone version in Windows 11. We have used the P-code version

7/15/22

7/13/22

Some questions about getting the multi-shell diffusion in scan

Hi experts, I have some questions about multi-shell diffusion image scanning. 1. In our pilot, I

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Some questions about getting the multi-shell diffusion in scan

Hi experts, I have some questions about multi-shell diffusion image scanning. 1. In our pilot, I

7/13/22

Arash Aghamohammadi Sereshki, stje...@gmail.com2

7/13/22

CSD-based tractography using multi-shell data

Looks like there are two things happening, an error and a warning. For the error on linux, looks like

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CSD-based tractography using multi-shell data

Looks like there are two things happening, an error and a warning. For the error on linux, looks like

7/13/22

m.h nili, samane pirmoradian2

4/14/22

convert registered tractography file (tck+T1) to Dicom

hi I want use harvard atlas in explore dti .i dont find this atlas. please help me. On Friday, April

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convert registered tractography file (tck+T1) to Dicom

hi I want use harvard atlas in explore dti .i dont find this atlas. please help me. On Friday, April

4/14/22

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