ExploreDTI

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Welcome to the Q&A forum for ExploreDTI (www.ExploreDTI.com)!
I hope you'll find what you're looking for in this Google Group...

Alexander Leemans

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Feb 2

Determining how many streamlines are seeded in whole brain tractography

Hello - I am wondering how I can determine how many streamlines were seeded (per voxel) in my whole

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Determining how many streamlines are seeded in whole brain tractography

Hello - I am wondering how I can determine how many streamlines were seeded (per voxel) in my whole

Feb 2

Jan 17

Different results on different computers_network analysis

Hi all, Is there any specific technical reason why the network analysis would yield different results

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Different results on different computers_network analysis

Hi all, Is there any specific technical reason why the network analysis would yield different results

Jan 17

Venkateswaran Rajagopalan

Jan 16

Registration Process in Network Analysis plugin

Dear All I searched through extensively in the forum to find an answer regarding how registration is

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Registration Process in Network Analysis plugin

Dear All I searched through extensively in the forum to find an answer regarding how registration is

Jan 16

longs...@gmail.com2

Jan 9

Creating individual space atlas for fMRI data using ExploreDTI.

I also might found a "bug" when using a customized atals for the connectome analysis. If

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Creating individual space atlas for fMRI data using ExploreDTI.

I also might found a "bug" when using a customized atals for the connectome analysis. If

Jan 9

leilan...@gmail.com2

12/13/22

Export motion distortion corrected files from MAT to NIFTI

another question I had is: when converting a tractography MAT file to TRK, is the TRK file in RAS

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Export motion distortion corrected files from MAT to NIFTI

another question I had is: when converting a tractography MAT file to TRK, is the TRK file in RAS

12/13/22

Alexander Leemans

11/22/22

Next ExploreDTI workshop

We're holding another ExploreDTI workshop! Where: Bergen, Norway When: 26-28 June, 2023 Details:

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Next ExploreDTI workshop

We're holding another ExploreDTI workshop! Where: Bergen, Norway When: 26-28 June, 2023 Details:

11/22/22

11/22/22

Hello everyone, After following the manual I managed to create an EPI/EC corrected version but there

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Hello everyone, After following the manual I managed to create an EPI/EC corrected version but there

11/22/22

11/10/22

Hi! I have a problem with ExploreDTI program running. After the installation, I used the program 2-3

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Hi! I have a problem with ExploreDTI program running. After the installation, I used the program 2-3

11/10/22

11/6/22

converting 3d nii to 4d

Hi, I am trying to convert my nii files from 3d to 4d. When I am choosing 'single data set

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converting 3d nii to 4d

Hi, I am trying to convert my nii files from 3d to 4d. When I am choosing 'single data set

11/6/22

10/6/22

Hello, I am trying to run the MainExporeDTI.p file, but everytime an error returns "Unrecognized

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Hello, I am trying to run the MainExporeDTI.p file, but everytime an error returns "Unrecognized

10/6/22

9/24/22

twisted network analyis regestration

I'm trying to use ExploreDTI to get connectivity matrix from atlas template/labels, The CSD

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twisted network analyis regestration

I'm trying to use ExploreDTI to get connectivity matrix from atlas template/labels, The CSD

9/24/22

Angela Bernabeu Sanz

8/30/22

About exporting data

Dear experts, I want to segment several white matter tracts and get the data for statistics. In this

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About exporting data

Dear experts, I want to segment several white matter tracts and get the data for statistics. In this

8/30/22

8/8/22

CSD tractography error with multi-shell data

Hello ExploreDTI I'm trying to analyze a multi shell DTI dataset with the following parameters

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CSD tractography error with multi-shell data

Hello ExploreDTI I'm trying to analyze a multi shell DTI dataset with the following parameters

8/8/22

Demi van den Ende

7/27/22

error EPI correction: the data should be in 3D

Dear experts, I want to perform the EPI correction on my data. I took all the steps described in the

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error EPI correction: the data should be in 3D

Dear experts, I want to perform the EPI correction on my data. I took all the steps described in the

7/27/22

Erick Hernández Gutiérrez

7/21/22

multi-tensor visualization.

Dear experts, I'm working with multi-tensor images and I would like to ask if ExploreDTI is

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multi-tensor visualization.

Dear experts, I'm working with multi-tensor images and I would like to ask if ExploreDTI is

7/21/22

Eleonora Picerni

7/21/22

multishell bval

Dear experts, I'm processing some raw data from a public dataset. I have a multishell bval (the

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multishell bval

Dear experts, I'm processing some raw data from a public dataset. I have a multishell bval (the

7/21/22

Jianzhong He, … Yuan3

7/20/22

Hi! The scripts are extremely helpful! But I wonder that in README it says "Note that several

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Hi! The scripts are extremely helpful! But I wonder that in README it says "Note that several

7/20/22

Eleonora Picerni

7/19/22

Dear experts, In converting some raw data into dti.mat. When checking for parameters settings (after

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Dear experts, In converting some raw data into dti.mat. When checking for parameters settings (after

7/19/22

Eleonora Picerni, Hami Mahdavinataj2

7/15/22

calculating dti.mat in standalone version of explore DTI

Hi, We had the same issue with standalone version in Windows 11. We have used the P-code version

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calculating dti.mat in standalone version of explore DTI

Hi, We had the same issue with standalone version in Windows 11. We have used the P-code version

7/15/22

7/13/22

Some questions about getting the multi-shell diffusion in scan

Hi experts, I have some questions about multi-shell diffusion image scanning. 1. In our pilot, I

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Some questions about getting the multi-shell diffusion in scan

Hi experts, I have some questions about multi-shell diffusion image scanning. 1. In our pilot, I

7/13/22

Arash Aghamohammadi Sereshki, stje...@gmail.com2

7/13/22

CSD-based tractography using multi-shell data

Looks like there are two things happening, an error and a warning. For the error on linux, looks like

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CSD-based tractography using multi-shell data

Looks like there are two things happening, an error and a warning. For the error on linux, looks like

7/13/22

m.h nili, samane pirmoradian2

4/14/22

convert registered tractography file (tck+T1) to Dicom

hi I want use harvard atlas in explore dti .i dont find this atlas. please help me. On Friday, April

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convert registered tractography file (tck+T1) to Dicom

hi I want use harvard atlas in explore dti .i dont find this atlas. please help me. On Friday, April

4/14/22

Paul Wright, … samane pirmoradian6

4/14/22

Motion correction parameter definitions

hi I want use harvard atlas in explore dti .i dont find this atlas. please help me. On Friday, March

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motion_correction

Motion correction parameter definitions

hi I want use harvard atlas in explore dti .i dont find this atlas. please help me. On Friday, March

4/14/22

Diego Cardoso Fragoso2

4/5/22

EPI distortion using T1

I attached this example. The upper frontal lobes are distorted! Em terça-feira, 5 de abril de 2022 às

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EPI distortion using T1

I attached this example. The upper frontal lobes are distorted! Em terça-feira, 5 de abril de 2022 às

4/5/22

1/22/22

Find FA for one slice

Dear Sirs, I need to calculate FA map only on one slice. I has some analysis in MATLAB for that slice

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Find FA for one slice

Dear Sirs, I need to calculate FA map only on one slice. I has some analysis in MATLAB for that slice

1/22/22

josebour...@gmail.com

1/3/22

Brain connectivity toolbox - conectivity measures

Dear Sirs, I am trying to extract graph theory measures using the brain connectivity toolbox (BCT). I

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Brain connectivity toolbox - conectivity measures

Dear Sirs, I am trying to extract graph theory measures using the brain connectivity toolbox (BCT). I

1/3/22

12/17/21

How to get more scripts or functions

I want to batch process data, but the git hub doesn't have the script I want, is there a more

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How to get more scripts or functions

I want to batch process data, but the git hub doesn't have the script I want, is there a more

12/17/21

11/15/21

Downloading DTI Explore on new Macbook Pro with M1 chip

I downloaded DTI explore and MATLAB runtime version R2021b (9.11). I am using the new Macbook Pro

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Downloading DTI Explore on new Macbook Pro with M1 chip

I downloaded DTI explore and MATLAB runtime version R2021b (9.11). I am using the new Macbook Pro

11/15/21

11/9/21

Registration DTI and DW-MRS data

Hi, We acquired DTI data using 3T Philips MRI scanner (data exported in PAR/REC). In addition, we are

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Registration DTI and DW-MRS data

Hi, We acquired DTI data using 3T Philips MRI scanner (data exported in PAR/REC). In addition, we are

11/9/21

10/25/21

install ExploreDTI

Hi. I want to install ExploreDTI on my system. I have MATLAB 2018 and Windows 10. I couldn't even

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install ExploreDTI

Hi. I want to install ExploreDTI on my system. I have MATLAB 2018 and Windows 10. I couldn't even

10/25/21

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